RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 BARHL1Q9BZE3 327 aa11.82□□□□□ -0.52
XRCC1-208ENST00000598422 PPIL3Q9H2H8 161 aaKnown RBP11.82□□□□□ -0.52
XRCC1-208ENST00000598422 PLCXD1Q9NUJ7 323 aa11.82□□□□□ -0.52
XRCC1-208ENST00000598422 FBLN5Q9UBX5 448 aa11.82□□□□□ -0.52
XRCC1-208ENST00000598422 ST3GAL6Q9Y274 331 aa11.82□□□□□ -0.52
XRCC1-208ENST00000598422 ERGIC3Q9Y282 383 aa11.82□□□□□ -0.52
XRCC1-208ENST00000598422 MGAM2Q2M2H8 2515 aa11.82□□□□□ -0.52
XRCC1-208ENST00000598422 TRAV24A0A0B4J272 114 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 FAM172BPA6NC97 362 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 ZNF729A6NN14 1252 aaPredicted RBP11.81□□□□□ -0.52
XRCC1-208ENST00000598422 TOR1AO14656 332 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 ZNF780AO75290 641 aaPredicted RBP11.81□□□□□ -0.52
XRCC1-208ENST00000598422 OR7C1O76099 320 aaPredicted RBP11.81□□□□□ -0.52
XRCC1-208ENST00000598422 CELP19835 753 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 FSTP19883 344 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 SERPINA2P20848 420 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 C21orf33P30042 268 aaPredicted RBP11.81□□□□□ -0.52
XRCC1-208ENST00000598422 KIR2DS4P43632 304 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 KCNJ3P48549 501 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 RAB13P51153 203 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 KRTAP10-3P60369 221 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 SLC22A6Q4U2R8 563 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 Q6ZTK2 550 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 TMEM219Q86XT9 240 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 OSR2Q8N2R0 312 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 JAGN1Q8N5M9 183 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 ZNF565Q8N9K5 539 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 OR4P4Q8NGL7 312 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 PIFOQ8TCI5 191 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 FBLIM1Q8WUP2 373 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 THRSPQ92748 146 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 TFAP2CQ92754 450 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 CREB3L1Q96BA8 519 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 ORAI1Q96D31 301 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 OR14A2Q96R54 314 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 IL36GQ9NZH8 169 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 DPM3Q9P2X0 92 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 KIF25Q9UIL4 384 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 SIGLEC9Q9Y336 463 aa11.81□□□□□ -0.52
XRCC1-208ENST00000598422 TRAV8-7A0A075B6U6 113 aa11.8□□□□□ -0.52
XRCC1-208ENST00000598422 KBTBD11-OT1A0A1B0GTJ5 212 aa11.8□□□□□ -0.52
XRCC1-208ENST00000598422 A0A1W2PPK0 400 aa11.8□□□□□ -0.52
XRCC1-208ENST00000598422 GTF2F2P13984 249 aa11.8□□□□□ -0.52
XRCC1-208ENST00000598422 NFYBP25208 207 aa11.8□□□□□ -0.52
XRCC1-208ENST00000598422 MAPK3P27361 379 aaPredicted RBP11.8□□□□□ -0.52
XRCC1-208ENST00000598422 CEACAM3P40198 252 aa11.8□□□□□ -0.52
XRCC1-208ENST00000598422 DYNLT3P51808 116 aa11.8□□□□□ -0.52
XRCC1-208ENST00000598422 RBM11P57052 281 aaKnown RBP11.8□□□□□ -0.52
XRCC1-208ENST00000598422 BDH1Q02338 343 aa11.8□□□□□ -0.52
XRCC1-208ENST00000598422 GPR176Q14439 515 aa11.8□□□□□ -0.52
XRCC1-208ENST00000598422 RBM39Q14498 530 aaKnown RBP11.8□□□□□ -0.52
XRCC1-208ENST00000598422 ARSJQ5FYB0 599 aaPredicted RBP11.8□□□□□ -0.52
XRCC1-208ENST00000598422 LDLRAD2Q5SZI1 272 aa11.8□□□□□ -0.52
XRCC1-208ENST00000598422 LAIR2Q6ISS4 152 aa11.8□□□□□ -0.52
XRCC1-208ENST00000598422 BAIAP2L2Q6UXY1 529 aa11.8□□□□□ -0.52
XRCC1-208ENST00000598422 ASCL4Q6XD76 172 aa11.8□□□□□ -0.52
XRCC1-208ENST00000598422 LINC00596Q86U02 117 aa11.8□□□□□ -0.52
XRCC1-208ENST00000598422 ZNF485Q8NCK3 441 aa11.8□□□□□ -0.52
XRCC1-208ENST00000598422 NEK7Q8TDX7 302 aa11.8□□□□□ -0.52
XRCC1-208ENST00000598422 CAPSLQ8WWF8 208 aa11.8□□□□□ -0.52
XRCC1-208ENST00000598422 DPCDQ9BVM2 203 aaPredicted RBP11.8□□□□□ -0.52
XRCC1-208ENST00000598422 CALYQ9NYX4 217 aa11.8□□□□□ -0.52
XRCC1-208ENST00000598422 MAGEA13PA6NCF6 341 aa11.79□□□□□ -0.52
XRCC1-208ENST00000598422 A6NDX4 124 aa11.79□□□□□ -0.52
XRCC1-208ENST00000598422 LEUTXA8MZ59 168 aa11.79□□□□□ -0.52
XRCC1-208ENST00000598422 IGFBP3P17936 291 aaPredicted RBP11.79□□□□□ -0.52
XRCC1-208ENST00000598422 CD34P28906 385 aa11.79□□□□□ -0.52
XRCC1-208ENST00000598422 EFNB2P52799 333 aa11.79□□□□□ -0.52
XRCC1-208ENST00000598422 PRRX1P54821 245 aa11.79□□□□□ -0.52
XRCC1-208ENST00000598422 RPS11P62280 158 aaKnown RBP eCLIP11.79□□□□□ -0.52
XRCC1-208ENST00000598422 HERPUD1Q15011 391 aa11.79□□□□□ -0.52
XRCC1-208ENST00000598422 C2orf68Q2NKX9 166 aa11.79□□□□□ -0.52
XRCC1-208ENST00000598422 NHLRC3Q5JS37 347 aa11.79□□□□□ -0.52
XRCC1-208ENST00000598422 AWAT2Q6E213 333 aa11.79□□□□□ -0.52
XRCC1-208ENST00000598422 KLHDC1Q8N7A1 406 aa11.79□□□□□ -0.52
XRCC1-208ENST00000598422 SUMF2Q8NBJ7 301 aa11.79□□□□□ -0.52
XRCC1-208ENST00000598422 Q8NFD4 153 aa11.79□□□□□ -0.52
XRCC1-208ENST00000598422 OR13A1Q8NGR1 328 aa11.79□□□□□ -0.52
XRCC1-208ENST00000598422 MYDGFQ969H8 173 aa11.79□□□□□ -0.52
XRCC1-208ENST00000598422 MUL1Q969V5 352 aa11.79□□□□□ -0.52
XRCC1-208ENST00000598422 DERL3Q96Q80 235 aa11.79□□□□□ -0.52
XRCC1-208ENST00000598422 MND1Q9BWT6 205 aa11.79□□□□□ -0.52
XRCC1-208ENST00000598422 MMP27Q9H306 513 aa11.79□□□□□ -0.52
XRCC1-208ENST00000598422 ZNF286AQ9HBT8 521 aa11.79□□□□□ -0.52
XRCC1-208ENST00000598422 SCN3BQ9NY72 215 aa11.79□□□□□ -0.52
XRCC1-208ENST00000598422 NKX1-2Q9UD57 310 aaPredicted RBP11.79□□□□□ -0.52
XRCC1-208ENST00000598422 MRPS28Q9Y2Q9 187 aaKnown RBP11.79□□□□□ -0.52
XRCC1-208ENST00000598422 TRBV5-7A0A0A0MS05 114 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 TMEM30CPA0ZSE6 113 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 PTGES3LE9PB15 166 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 GEMIN2O14893 280 aaKnown RBP11.78□□□□□ -0.52
XRCC1-208ENST00000598422 PEX14O75381 377 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 GPX5O75715 221 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 IL1AP01583 271 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 MAS1P04201 325 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 CDK1P06493 297 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 VSIG10L2P0DP72 767 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 JUNBP17275 347 aaPredicted RBP11.78□□□□□ -0.52
XRCC1-208ENST00000598422 BRS3P32247 399 aa11.78□□□□□ -0.52
XRCC1-208ENST00000598422 GDNFP39905 211 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms