RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 ALKBH1Q13686 389 aaKnown RBP11.17□□□□□ -0.62
SCAF1-203ENST00000598359 MIDNQ504T8 468 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 HIST2H2BDQ6DRA6 164 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 DMKNQ6E0U4 476 aaPredicted RBP11.17□□□□□ -0.62
SCAF1-203ENST00000598359 C22orf42Q6IC83 251 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 Q6ZNX1 250 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 UTS2BQ765I0 119 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 GDPD3Q7L5L3 318 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 TCF23Q7RTU1 214 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 CCDC190Q86UF4 302 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 DYNAPQ8N1N2 210 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 DNAAF1Q8NEP3 725 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 OR52N4Q8NGI2 321 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 PPP1R35Q8TAP8 253 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 C10orf35Q96D05 121 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 HHLA2Q9UM44 414 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 SIGLEC9Q9Y336 463 aa11.17□□□□□ -0.62
SCAF1-203ENST00000598359 IGKV1-12A0A0C4DH73 117 aa11.16□□□□□ -0.62
SCAF1-203ENST00000598359 SIRPB1O00241 398 aa11.16□□□□□ -0.62
SCAF1-203ENST00000598359 PSPNO60542 156 aa11.16□□□□□ -0.62
SCAF1-203ENST00000598359 IGKV1D-12P01611 117 aa11.16□□□□□ -0.62
SCAF1-203ENST00000598359 OCM2P0CE71 109 aa11.16□□□□□ -0.62
SCAF1-203ENST00000598359 OCMP0CE72 109 aaPredicted RBP11.16□□□□□ -0.62
SCAF1-203ENST00000598359 PRKACBP22694 351 aa11.16□□□□□ -0.62
SCAF1-203ENST00000598359 S100A5P33763 92 aa11.16□□□□□ -0.62
SCAF1-203ENST00000598359 CCR9P51686 369 aa11.16□□□□□ -0.62
SCAF1-203ENST00000598359 PDZK1IP1Q13113 114 aa11.16□□□□□ -0.62
SCAF1-203ENST00000598359 GRK1Q15835 563 aa11.16□□□□□ -0.62
SCAF1-203ENST00000598359 LDLRAD2Q5SZI1 272 aa11.16□□□□□ -0.62
SCAF1-203ENST00000598359 SLC35E4Q6ICL7 350 aa11.16□□□□□ -0.62
SCAF1-203ENST00000598359 TMEM91Q6ZNR0 172 aa11.16□□□□□ -0.62
SCAF1-203ENST00000598359 OR8H2Q8N162 312 aa11.16□□□□□ -0.62
SCAF1-203ENST00000598359 FAM58AQ8N1B3 248 aa11.16□□□□□ -0.62
SCAF1-203ENST00000598359 ZFP41Q8N8Y5 198 aa11.16□□□□□ -0.62
SCAF1-203ENST00000598359 OR4S1Q8NGB4 309 aa11.16□□□□□ -0.62
SCAF1-203ENST00000598359 OR5R1Q8NH85 324 aa11.16□□□□□ -0.62
SCAF1-203ENST00000598359 HAVCR2Q8TDQ0 301 aa11.16□□□□□ -0.62
SCAF1-203ENST00000598359 CHPT1Q8WUD6 406 aa11.16□□□□□ -0.62
SCAF1-203ENST00000598359 SNX22Q96L94 193 aa11.16□□□□□ -0.62
SCAF1-203ENST00000598359 PGLYRP3Q96LB9 341 aa11.16□□□□□ -0.62
SCAF1-203ENST00000598359 C6orf62Q9GZU0 229 aaPredicted RBP11.16□□□□□ -0.62
SCAF1-203ENST00000598359 SIRT4Q9Y6E7 314 aaPredicted RBP11.16□□□□□ -0.62
SCAF1-203ENST00000598359 TRBV2A0A0J9YWF9 115 aa11.15□□□□□ -0.62
SCAF1-203ENST00000598359 PNMA8CA0A1B0GUJ8 204 aa11.15□□□□□ -0.62
SCAF1-203ENST00000598359 hCG_1809904A0A1W2PP81 198 aa11.15□□□□□ -0.62
SCAF1-203ENST00000598359 A0A1W2PPE2 198 aa11.15□□□□□ -0.62
SCAF1-203ENST00000598359 A0A1W2PR64 198 aa11.15□□□□□ -0.62
SCAF1-203ENST00000598359 A0A1W2PRV1 198 aa11.15□□□□□ -0.62
SCAF1-203ENST00000598359 C17orf98A8MV24 154 aa11.15□□□□□ -0.62
SCAF1-203ENST00000598359 CDRT1O95170 752 aa11.15□□□□□ -0.62
SCAF1-203ENST00000598359 CYB5AP00167 134 aa11.15□□□□□ -0.62
SCAF1-203ENST00000598359 ZNF728P0DKX0 622 aa11.15□□□□□ -0.62
SCAF1-203ENST00000598359 RAB13P51153 203 aa11.15□□□□□ -0.62
SCAF1-203ENST00000598359 LGALS4P56470 323 aa11.15□□□□□ -0.62
SCAF1-203ENST00000598359 MRPL28Q13084 256 aaKnown RBP11.15□□□□□ -0.62
SCAF1-203ENST00000598359 LRRC75BQ2VPJ9 315 aa11.15□□□□□ -0.62
SCAF1-203ENST00000598359 CCDC58Q4VC31 144 aa11.15□□□□□ -0.62
SCAF1-203ENST00000598359 CRIP3Q6Q6R5 217 aa11.15□□□□□ -0.62
SCAF1-203ENST00000598359 LHFPL2Q6ZUX7 228 aa11.15□□□□□ -0.62
SCAF1-203ENST00000598359 MINDY2Q8NBR6 621 aa11.15□□□□□ -0.62
SCAF1-203ENST00000598359 TMEM203Q969S6 136 aa11.15□□□□□ -0.62
SCAF1-203ENST00000598359 PDCD1LG2Q9BQ51 273 aa11.15□□□□□ -0.62
SCAF1-203ENST00000598359 MEGF9Q9H1U4 602 aa11.15□□□□□ -0.62
SCAF1-203ENST00000598359 C16orf95Q9H693 158 aa11.15□□□□□ -0.62
SCAF1-203ENST00000598359 NEK6Q9HC98 313 aa11.15□□□□□ -0.62
SCAF1-203ENST00000598359 MEGF11A6BM72 1044 aa11.14□□□□□ -0.63
SCAF1-203ENST00000598359 CHST1O43916 411 aa11.14□□□□□ -0.63
SCAF1-203ENST00000598359 TSPAN9O75954 239 aa11.14□□□□□ -0.63
SCAF1-203ENST00000598359 ZFPL1O95159 310 aa11.14□□□□□ -0.63
SCAF1-203ENST00000598359 ARG1P05089 322 aa11.14□□□□□ -0.63
SCAF1-203ENST00000598359 IGHV1-8P0DP01 117 aa11.14□□□□□ -0.63
SCAF1-203ENST00000598359 SDC2P34741 201 aa11.14□□□□□ -0.63
SCAF1-203ENST00000598359 OR3A1P47881 315 aa11.14□□□□□ -0.63
SCAF1-203ENST00000598359 MTNR1BP49286 362 aa11.14□□□□□ -0.63
SCAF1-203ENST00000598359 SCN1BQ07699 218 aa11.14□□□□□ -0.63
SCAF1-203ENST00000598359 CDK5R1Q15078 307 aa11.14□□□□□ -0.63
SCAF1-203ENST00000598359 ASPHD2Q6ICH7 369 aa11.14□□□□□ -0.63
SCAF1-203ENST00000598359 RPL22L1Q6P5R6 122 aaKnown RBP11.14□□□□□ -0.63
SCAF1-203ENST00000598359 BAIAP2L2Q6UXY1 529 aa11.14□□□□□ -0.63
SCAF1-203ENST00000598359 Q8IYB0 196 aa11.14□□□□□ -0.63
SCAF1-203ENST00000598359 MS4A15Q8N5U1 240 aa11.14□□□□□ -0.63
SCAF1-203ENST00000598359 PIFOQ8TCI5 191 aa11.14□□□□□ -0.63
SCAF1-203ENST00000598359 SPSB1Q96BD6 273 aa11.14□□□□□ -0.63
SCAF1-203ENST00000598359 SMIM19Q96E16 107 aa11.14□□□□□ -0.63
SCAF1-203ENST00000598359 ZNF714Q96N38 554 aa11.14□□□□□ -0.63
SCAF1-203ENST00000598359 NKX3-1Q99801 234 aaPredicted RBP11.14□□□□□ -0.63
SCAF1-203ENST00000598359 TMED9Q9BVK6 235 aa11.14□□□□□ -0.63
SCAF1-203ENST00000598359 ZCCHC4Q9H5U6 513 aa11.14□□□□□ -0.63
SCAF1-203ENST00000598359 TCF7L1Q9HCS4 588 aa11.14□□□□□ -0.63
SCAF1-203ENST00000598359 FAM90A8PA6NJQ4 464 aa11.13□□□□□ -0.63
SCAF1-203ENST00000598359 ODF3BA8MYP8 253 aa11.13□□□□□ -0.63
SCAF1-203ENST00000598359 UPK1BO75841 260 aa11.13□□□□□ -0.63
SCAF1-203ENST00000598359 MMP23AO75900 390 aa11.13□□□□□ -0.63
SCAF1-203ENST00000598359 CLEC2LP0C7M8 214 aa11.13□□□□□ -0.63
SCAF1-203ENST00000598359 GBX2P52951 348 aaPredicted RBP11.13□□□□□ -0.63
SCAF1-203ENST00000598359 IFITM3Q01628 133 aa11.13□□□□□ -0.63
SCAF1-203ENST00000598359 MEF2CQ06413 473 aaPredicted RBP11.13□□□□□ -0.63
SCAF1-203ENST00000598359 ZNF146Q15072 292 aa11.13□□□□□ -0.63
SCAF1-203ENST00000598359 FAM189A2Q15884 450 aa11.13□□□□□ -0.63
SCAF1-203ENST00000598359 RGS21Q2M5E4 152 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms