RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 CYP2R1Q6VVX0 501 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 LYPD6Q86Y78 171 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 FAM71E2Q8N5Q1 922 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 Q8N6K4 173 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 ZNF565Q8N9K5 539 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 Q8N9W7 124 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 OR2T10Q8NGZ9 312 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 GIPC3Q8TF64 312 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 PP6455Q8WZ26 134 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 LEAP2Q969E1 77 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 C10orf35Q96D05 121 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 KCTD7Q96MP8 289 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 MNTQ99583 582 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 RASL11BQ9BPW5 248 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 COMMD4Q9H0A8 199 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 GHITMQ9H3K2 345 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 ING3Q9NXR8 418 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 CALYQ9NYX4 217 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 PSG11Q9UQ72 335 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 VSIG4Q9Y279 399 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 RYR1P21817 5038 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 IGHV1-3A0A0C4DH29 117 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 A8MZ25 164 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 SLC33A1O00400 549 aaPredicted RBP7.86□□□□□ -1.15
TRIM28-210ENST00000597618 MAGEB4O15481 346 aaPredicted RBP7.86□□□□□ -1.15
TRIM28-210ENST00000597618 IL1AP01583 271 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 OSMP13725 252 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 PRKACBP22694 351 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 MYF6P23409 242 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 GNG10P50151 68 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 ISL1P61371 349 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 SCN1BQ07699 218 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 SRSF7Q16629 238 aaKnown RBP eCLIP7.86□□□□□ -1.15
TRIM28-210ENST00000597618 FAM98BQ52LJ0 330 aaKnown RBP7.86□□□□□ -1.15
TRIM28-210ENST00000597618 SLC16A12Q6ZSM3 486 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 LHFPL2Q6ZUX7 228 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 MOB3BQ86TA1 216 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 OR8H1Q8NGG4 311 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 IL17DQ8TAD2 202 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 DCUN1D4Q92564 292 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 ST6GALNAC6Q969X2 333 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 S1PR3Q99500 378 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 CHCHD6Q9BRQ6 235 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 ADI1Q9BV57 179 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 OSBPL10Q9BXB5 764 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 PPIL3Q9H2H8 161 aaKnown RBP7.86□□□□□ -1.15
TRIM28-210ENST00000597618 LINC00574Q9H8X3 128 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 ZNF556Q9HAH1 456 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 GNB4Q9HAV0 340 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 RHOFQ9HBH0 211 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 IDI2-AS1Q9NZ38 188 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 ACTR3BQ9P1U1 418 aa7.86□□□□□ -1.15
TRIM28-210ENST00000597618 MRM2Q9UI43 246 aaKnown RBP7.86□□□□□ -1.15
TRIM28-210ENST00000597618 IGHV3-72A0A0B4J1Y9 119 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 TCRBV5S2A0A599 114 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 ZNF670-ZNF695F2Z2N8 137 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 H3BSH0 61 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 SASH3O75995 380 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 KDM4BO94953 1096 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 RPP14O95059 124 aaKnown RBP7.85□□□□□ -1.15
TRIM28-210ENST00000597618 GAPDHP04406 335 aaKnown RBP7.85□□□□□ -1.15
TRIM28-210ENST00000597618 IFNA6P05013 189 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 CGB3P0DN86 165 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 CGB7P0DN87 165 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 C21orf33P30042 268 aaPredicted RBP7.85□□□□□ -1.15
TRIM28-210ENST00000597618 SOX6P35712 828 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 KIR3DL2P43630 455 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 MNAT1P51948 309 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 ZP1P60852 638 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 GNB1P62873 340 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 PDZK1IP1Q13113 114 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 CATSPERDQ86XM0 798 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 SGPP2Q8IWX5 399 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 SLC35F2Q8IXU6 374 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 ZNF491Q8N8L2 437 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 OR10A7Q8NGE5 316 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 EME1Q96AY2 570 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 SPSB1Q96BD6 273 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 OR5B12Q96R08 314 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 HSPB9Q9BQS6 159 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 OR51J1Q9H342 316 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 SLC25A19Q9HC21 320 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 PLSCR3Q9NRY6 295 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 C19orf73Q9NVV2 129 aa7.85□□□□□ -1.15
TRIM28-210ENST00000597618 MEIKINA0A087WXM9 373 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 IGKV1-12A0A0C4DH73 117 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 LOC107986453A0A1B0GWG9 222 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 NPIPB11E5RHQ5 1161 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 DEGS1O15121 323 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 MOSP00540 346 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 IGKV1D-12P01611 117 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 KRT8P05787 483 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 OR8U9P0C7N5 309 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 OCM2P0CE71 109 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 OCMP0CE72 109 aaPredicted RBP7.84□□□□□ -1.15
TRIM28-210ENST00000597618 REG1BP48304 166 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 KIAA0141Q14154 515 aaPredicted RBP7.84□□□□□ -1.15
TRIM28-210ENST00000597618 LTC4SQ16873 150 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 Q6P435 159 aa7.84□□□□□ -1.15
TRIM28-210ENST00000597618 ACSM6Q6P461 480 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms