RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 COQ2Q96H96 371 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 BARHL1Q9BZE3 327 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 TAS2R3Q9NYW6 316 aa14.91□□□□□ -0.02
ZNF558-204ENST00000596172 TRGV10A0A0A0MS01 117 aa14.9□□□□□ -0.02
ZNF558-204ENST00000596172 A0A1W2PP11 408 aa14.9□□□□□ -0.02
ZNF558-204ENST00000596172 ODAMA1E959 279 aa14.9□□□□□ -0.02
ZNF558-204ENST00000596172 H3BUI4 141 aa14.9□□□□□ -0.02
ZNF558-204ENST00000596172 SLC22A1O15245 554 aa14.9□□□□□ -0.02
ZNF558-204ENST00000596172 OR7C1O76099 320 aaPredicted RBP14.9□□□□□ -0.02
ZNF558-204ENST00000596172 IGHV1-8P0DP01 117 aa14.9□□□□□ -0.02
ZNF558-204ENST00000596172 PSMD7P51665 324 aa14.9□□□□□ -0.02
ZNF558-204ENST00000596172 UBA52P62987 128 aaKnown RBP14.9□□□□□ -0.02
ZNF558-204ENST00000596172 KLRD1Q13241 179 aa14.9□□□□□ -0.02
ZNF558-204ENST00000596172 SUMF2Q8NBJ7 301 aa14.9□□□□□ -0.02
ZNF558-204ENST00000596172 ZDHHC16Q969W1 377 aa14.9□□□□□ -0.02
ZNF558-204ENST00000596172 DPCDQ9BVM2 203 aaPredicted RBP14.9□□□□□ -0.02
ZNF558-204ENST00000596172 SPACA1Q9HBV2 294 aa14.9□□□□□ -0.02
ZNF558-204ENST00000596172 TRAV1-2A0A0B4J238 106 aa14.89□□□□□ -0.03
ZNF558-204ENST00000596172 A0A0U1RQK1 487 aa14.89□□□□□ -0.03
ZNF558-204ENST00000596172 MGMTP16455 207 aa14.89□□□□□ -0.03
ZNF558-204ENST00000596172 CALRP27797 417 aaKnown RBP14.89□□□□□ -0.03
ZNF558-204ENST00000596172 PSMB9P28065 219 aa14.89□□□□□ -0.03
ZNF558-204ENST00000596172 RANBP1P43487 201 aa14.89□□□□□ -0.03
ZNF558-204ENST00000596172 PRB3Q04118 309 aaPredicted RBP14.89□□□□□ -0.03
ZNF558-204ENST00000596172 TAF9Q16594 264 aa14.89□□□□□ -0.03
ZNF558-204ENST00000596172 SYT6Q5T7P8 510 aaPredicted RBP14.89□□□□□ -0.03
ZNF558-204ENST00000596172 TMEM86BQ8N661 226 aa14.89□□□□□ -0.03
ZNF558-204ENST00000596172 TMEM104Q8NE00 496 aa14.89□□□□□ -0.03
ZNF558-204ENST00000596172 OR6M1Q8NGM8 313 aa14.89□□□□□ -0.03
ZNF558-204ENST00000596172 C19orf24Q9BVV8 132 aa14.89□□□□□ -0.03
ZNF558-204ENST00000596172 CST11Q9H112 138 aa14.89□□□□□ -0.03
ZNF558-204ENST00000596172 GAL3ST2Q9H3Q3 398 aa14.89□□□□□ -0.03
ZNF558-204ENST00000596172 OR6C3Q9NZP0 311 aa14.89□□□□□ -0.03
ZNF558-204ENST00000596172 RCC2Q9P258 522 aaKnown RBP14.89□□□□□ -0.03
ZNF558-204ENST00000596172 FAM96BQ9Y3D0 163 aa14.89□□□□□ -0.03
ZNF558-204ENST00000596172 DNHD1Q96M86 4753 aa14.88□□□□□ -0.03
ZNF558-204ENST00000596172 MDFIC2A0A1B0GVS7 189 aa14.88□□□□□ -0.03
ZNF558-204ENST00000596172 DNAJC9-AS1A6NH13 148 aa14.88□□□□□ -0.03
ZNF558-204ENST00000596172 CRTAPO75718 401 aaPredicted RBP14.88□□□□□ -0.03
ZNF558-204ENST00000596172 GLAP06280 429 aa14.88□□□□□ -0.03
ZNF558-204ENST00000596172 CGB3P0DN86 165 aa14.88□□□□□ -0.03
ZNF558-204ENST00000596172 CGB7P0DN87 165 aa14.88□□□□□ -0.03
ZNF558-204ENST00000596172 HTR2CP28335 458 aa14.88□□□□□ -0.03
ZNF558-204ENST00000596172 SAA4P35542 130 aa14.88□□□□□ -0.03
ZNF558-204ENST00000596172 ATXN7L3Q14CW9 347 aaPredicted RBP14.88□□□□□ -0.03
ZNF558-204ENST00000596172 SLC9A3R2Q15599 337 aa14.88□□□□□ -0.03
ZNF558-204ENST00000596172 RSBN1Q5VWQ0 802 aaPredicted RBP14.88□□□□□ -0.03
ZNF558-204ENST00000596172 LDLRAD3Q86YD5 345 aa14.88□□□□□ -0.03
ZNF558-204ENST00000596172 ZNF565Q8N9K5 539 aa14.88□□□□□ -0.03
ZNF558-204ENST00000596172 OR11H6Q8NGC7 330 aa14.88□□□□□ -0.03
ZNF558-204ENST00000596172 OR13D1Q8NGV5 346 aa14.88□□□□□ -0.03
ZNF558-204ENST00000596172 SPATA3Q8NHX4 192 aa14.88□□□□□ -0.03
ZNF558-204ENST00000596172 Q96M66 194 aa14.88□□□□□ -0.03
ZNF558-204ENST00000596172 GFI1Q99684 422 aa14.88□□□□□ -0.03
ZNF558-204ENST00000596172 SELENOIQ9C0D9 397 aa14.88□□□□□ -0.03
ZNF558-204ENST00000596172 ZNF581Q9P0T4 197 aa14.88□□□□□ -0.03
ZNF558-204ENST00000596172 SESN1Q9Y6P5 492 aa14.88□□□□□ -0.03
ZNF558-204ENST00000596172 MEX3AA1L020 520 aaKnown RBP14.87□□□□□ -0.03
ZNF558-204ENST00000596172 MEIOCA2RUB1 952 aa14.87□□□□□ -0.03
ZNF558-204ENST00000596172 SLC17A2O00624 439 aa14.87□□□□□ -0.03
ZNF558-204ENST00000596172 HSPB6O14558 160 aa14.87□□□□□ -0.03
ZNF558-204ENST00000596172 TNFAIP8O95379 198 aa14.87□□□□□ -0.03
ZNF558-204ENST00000596172 BPNT1O95861 308 aa14.87□□□□□ -0.03
ZNF558-204ENST00000596172 RNASE1P07998 156 aaKnown RBP14.87□□□□□ -0.03
ZNF558-204ENST00000596172 MELTFP08582 738 aa14.87□□□□□ -0.03
ZNF558-204ENST00000596172 FBP1P09467 338 aa14.87□□□□□ -0.03
ZNF558-204ENST00000596172 VSIG8P0DPA2 414 aa14.87□□□□□ -0.03
ZNF558-204ENST00000596172 FGF9P31371 208 aaPredicted RBP14.87□□□□□ -0.03
ZNF558-204ENST00000596172 SLC35E4Q6ICL7 350 aa14.87□□□□□ -0.03
ZNF558-204ENST00000596172 HEPN1Q6WQI6 88 aa14.87□□□□□ -0.03
ZNF558-204ENST00000596172 ZNF782Q6ZMW2 699 aaPredicted RBP14.87□□□□□ -0.03
ZNF558-204ENST00000596172 TRAPPC6BQ86SZ2 158 aa14.87□□□□□ -0.03
ZNF558-204ENST00000596172 KCNG3Q8TAE7 436 aa14.87□□□□□ -0.03
ZNF558-204ENST00000596172 SSMEM1Q8WWF3 244 aa14.87□□□□□ -0.03
ZNF558-204ENST00000596172 SLC25A28Q96A46 364 aa14.87□□□□□ -0.03
ZNF558-204ENST00000596172 BANF2Q9H503 90 aa14.87□□□□□ -0.03
ZNF558-204ENST00000596172 LINC00574Q9H8X3 128 aa14.87□□□□□ -0.03
ZNF558-204ENST00000596172 AK6Q9Y3D8 172 aaKnown RBP14.87□□□□□ -0.03
ZNF558-204ENST00000596172 POMT1Q9Y6A1 747 aa14.87□□□□□ -0.03
ZNF558-204ENST00000596172 A0A1W2PRD5 423 aa14.86□□□□□ -0.03
ZNF558-204ENST00000596172 A0A1W2PRF3 423 aa14.86□□□□□ -0.03
ZNF558-204ENST00000596172 A0A1W2PRM7 423 aa14.86□□□□□ -0.03
ZNF558-204ENST00000596172 ZNF729A6NN14 1252 aaPredicted RBP14.86□□□□□ -0.03
ZNF558-204ENST00000596172 HOXA3O43365 443 aaPredicted RBP14.86□□□□□ -0.03
ZNF558-204ENST00000596172 CLPXO76031 633 aa14.86□□□□□ -0.03
ZNF558-204ENST00000596172 QRFPP83859 136 aa14.86□□□□□ -0.03
ZNF558-204ENST00000596172 RBM39Q14498 530 aaKnown RBP14.86□□□□□ -0.03
ZNF558-204ENST00000596172 ATAD3CQ5T2N8 411 aa14.86□□□□□ -0.03
ZNF558-204ENST00000596172 OR52W1Q6IF63 320 aa14.86□□□□□ -0.03
ZNF558-204ENST00000596172 PNKDQ8N490 385 aa14.86□□□□□ -0.03
ZNF558-204ENST00000596172 PLPPR1Q8TBJ4 325 aa14.86□□□□□ -0.03
ZNF558-204ENST00000596172 AJUBAQ96IF1 538 aa14.86□□□□□ -0.03
ZNF558-204ENST00000596172 KIF25Q9UIL4 384 aa14.86□□□□□ -0.03
ZNF558-204ENST00000596172 V9GY05 133 aa14.86□□□□□ -0.03
ZNF558-204ENST00000596172 A0A087WXM4 84 aa14.85□□□□□ -0.03
ZNF558-204ENST00000596172 MEIKINA0A087WXM9 373 aa14.85□□□□□ -0.03
ZNF558-204ENST00000596172 KBTBD11-OT1A0A1B0GTJ5 212 aa14.85□□□□□ -0.03
ZNF558-204ENST00000596172 TMEM14DPA8MWL7 114 aa14.85□□□□□ -0.03
ZNF558-204ENST00000596172 ODF3BA8MYP8 253 aa14.85□□□□□ -0.03
ZNF558-204ENST00000596172 MCRIP1C9JLW8 97 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms