RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 UTP4Q969X6 686 aaKnown RBP7.83□□□□□ -1.16
LIG1-209ENST00000596104 FGGYQ96C11 551 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 OPALINQ96PE5 141 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 SPACA5Q96QH8 159 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 MBOAT4Q96T53 435 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 ASCL2Q99929 193 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 DCLRE1BQ9H816 532 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 CALYQ9NYX4 217 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 SCOCQ9UIL1 159 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 PSG11Q9UQ72 335 aa7.83□□□□□ -1.16
LIG1-209ENST00000596104 AMMECR1Q9Y4X0 333 aaPredicted RBP7.83□□□□□ -1.16
LIG1-209ENST00000596104 NPIPB11E5RHQ5 1161 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 FAM107AO95990 144 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 IL1AP01583 271 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 IGKV1D-33P01593 117 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 IGKV1-33P01594 117 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 IGHV3-7P01780 117 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 ISG15P05161 165 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 RPLP1P05386 114 aaKnown RBP7.82□□□□□ -1.16
LIG1-209ENST00000596104 CDX1P47902 265 aaPredicted RBP7.82□□□□□ -1.16
LIG1-209ENST00000596104 RAB7AP51149 207 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 RAB25P57735 213 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 ZNF85Q03923 595 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 SCN1BQ07699 218 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 MADCAM1Q13477 382 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 EBI3Q14213 229 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 KIR2DS1Q14954 304 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 DEFB136Q30KP8 78 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 TP53I3Q53FA7 332 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 C9orf66Q5T8R8 295 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 TMEM244Q5VVB8 128 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 TEX38Q6PEX7 206 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 LCNL1Q6ZST4 164 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 FOXRED2Q8IWF2 684 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 SAXO1Q8IYX7 474 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 RNF152Q8N8N0 203 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 OR5M8Q8NGP6 311 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 OR13A1Q8NGR1 328 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 OR10AC1Q8NH08 325 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 OSBPL10Q9BXB5 764 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 NCOR1P1Q9H4R4 102 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 RHOFQ9HBH0 211 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 KRT84Q9NSB2 600 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 IDI2-AS1Q9NZ38 188 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 FRRS1LQ9P0K9 344 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 KIF25Q9UIL4 384 aa7.82□□□□□ -1.16
LIG1-209ENST00000596104 DYNC2H1Q8NCM8 4307 aaKnown RBP7.81□□□□□ -1.16
LIG1-209ENST00000596104 AP4M1O00189 453 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 DEGS1O15121 323 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 ZNF20P17024 532 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 CHATP28329 748 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 ECI1P42126 302 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 GLP1RP43220 463 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 GPR12P47775 334 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 NANOS3P60323 173 aaKnown RBP7.81□□□□□ -1.16
LIG1-209ENST00000596104 ZP1P60852 638 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 FLOT2Q14254 428 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 PNLIPRP3Q17RR3 467 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 KLHL22Q53GT1 634 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 CASC10Q5T4H9 136 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 KDM4DQ6B0I6 523 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 FDX2Q6P4F2 183 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 TGIF2LXQ8IUE1 241 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 Q8N6K4 173 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 ZNF565Q8N9K5 539 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 OR51A4Q8NGJ6 313 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 OR13C9Q8NGT0 318 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 OR8U1Q8NH10 309 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 MUC7Q8TAX7 377 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 HAVCR2Q8TDQ0 301 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 HRASLS5Q96KN8 279 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 ABCG5Q9H222 651 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 GNG8Q9UK08 70 aa7.81□□□□□ -1.16
LIG1-209ENST00000596104 MEIKINA0A087WXM9 373 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 TRAV24A0A0B4J272 114 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 SEC14L6B5MCN3 397 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 H0YJX3 145 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 HSPB6O14558 160 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 ATP8B1O43520 1251 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 ELANEP08246 267 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 POLR2IP36954 125 aaKnown RBP7.8□□□□□ -1.16
LIG1-209ENST00000596104 GNG10P50151 68 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 PAX5Q02548 391 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 CFHR3Q02985 330 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 ZNF816Q0VGE8 651 aaPredicted RBP7.8□□□□□ -1.16
LIG1-209ENST00000596104 BNIP1Q12981 228 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 TMED1Q13445 227 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 FOXE3Q13461 319 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 GPR50Q13585 617 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 FHL3Q13643 280 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 CXorf66Q5JRM2 361 aaPredicted RBP7.8□□□□□ -1.16
LIG1-209ENST00000596104 RSBN1Q5VWQ0 802 aaPredicted RBP7.8□□□□□ -1.16
LIG1-209ENST00000596104 SLC16A12Q6ZSM3 486 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 FAM220AQ7Z4H9 259 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 IZUMO1Q8IYV9 350 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 Q8N9W7 124 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 RFESDQ8TAC1 157 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 EME1Q96AY2 570 aa7.8□□□□□ -1.16
LIG1-209ENST00000596104 EAF1Q96JC9 268 aaPredicted RBP7.8□□□□□ -1.16
LIG1-209ENST00000596104 NEK6Q9HC98 313 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms