RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 CENPVL3A0A0U1RRI6 287 aa11.78□□□□□ -0.52
LIG1-208ENST00000595758 ODAMA1E959 279 aa11.78□□□□□ -0.52
LIG1-208ENST00000595758 IFITM5A6NNB3 132 aa11.78□□□□□ -0.52
LIG1-208ENST00000595758 TMEM14DPA8MWL7 114 aa11.78□□□□□ -0.52
LIG1-208ENST00000595758 H3BUI4 141 aa11.78□□□□□ -0.52
LIG1-208ENST00000595758 ZNF728P0DKX0 622 aa11.78□□□□□ -0.52
LIG1-208ENST00000595758 PRTN3P24158 256 aa11.78□□□□□ -0.52
LIG1-208ENST00000595758 KCNJ3P48549 501 aa11.78□□□□□ -0.52
LIG1-208ENST00000595758 CLDN12P56749 244 aa11.78□□□□□ -0.52
LIG1-208ENST00000595758 OR2W3Q7Z3T1 314 aa11.78□□□□□ -0.52
LIG1-208ENST00000595758 TRAPPC6BQ86SZ2 158 aa11.78□□□□□ -0.52
LIG1-208ENST00000595758 TPRA1Q86W33 373 aa11.78□□□□□ -0.52
LIG1-208ENST00000595758 OR51D1Q8NGF3 324 aa11.78□□□□□ -0.52
LIG1-208ENST00000595758 FAM3DQ96BQ1 224 aa11.78□□□□□ -0.52
LIG1-208ENST00000595758 COQ2Q96H96 371 aa11.78□□□□□ -0.52
LIG1-208ENST00000595758 ZNF714Q96N38 554 aa11.78□□□□□ -0.52
LIG1-208ENST00000595758 CENPOQ9BU64 300 aa11.78□□□□□ -0.52
LIG1-208ENST00000595758 TMEM59Q9BXS4 323 aa11.78□□□□□ -0.52
LIG1-208ENST00000595758 MRPS26Q9BYN8 205 aaKnown RBP11.78□□□□□ -0.52
LIG1-208ENST00000595758 MS4A7Q9GZW8 240 aaPredicted RBP11.78□□□□□ -0.52
LIG1-208ENST00000595758 KCNK15Q9H427 330 aa11.78□□□□□ -0.52
LIG1-208ENST00000595758 OCEL1Q9H607 264 aa11.78□□□□□ -0.52
LIG1-208ENST00000595758 RNF167Q9H6Y7 350 aa11.78□□□□□ -0.52
LIG1-208ENST00000595758 UNKLQ9H9P5 680 aaKnown RBP11.78□□□□□ -0.52
LIG1-208ENST00000595758 STEAP1Q9UHE8 339 aa11.78□□□□□ -0.52
LIG1-208ENST00000595758 UBE2J1Q9Y385 318 aaPredicted RBP11.78□□□□□ -0.52
LIG1-208ENST00000595758 TRGV10A0A0A0MS01 117 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 IGHV1-69DA0A0B4J2H0 117 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 C17orf98A8MV24 154 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 AIREO43918 545 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 IGHV1-69P01742 117 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 FUT3P21217 361 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 SDC2P34741 201 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 DLX1P56177 255 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 DLX6P56179 175 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 BPIFB3P59826 476 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 RPS27AP62979 156 aaKnown RBP11.77□□□□□ -0.53
LIG1-208ENST00000595758 PRB3Q04118 309 aaPredicted RBP11.77□□□□□ -0.53
LIG1-208ENST00000595758 UNC119Q13432 240 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 C2orf76Q3KRA6 126 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 NCR3LG1Q68D85 454 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 RAB12Q6IQ22 244 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 BRICD5Q6PL45 260 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 TCF23Q7RTU1 214 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 PRIMA1Q86XR5 153 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 PDZD9Q8IXQ8 264 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 C11orf42Q8N5U0 333 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 NEK7Q8TDX7 302 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 C22orf15Q8WYQ4 148 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 CORO2AQ92828 525 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 TNFRSF14Q92956 283 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 NCOR1P1Q9H4R4 102 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 RCC2Q9P258 522 aaKnown RBP11.77□□□□□ -0.53
LIG1-208ENST00000595758 KIF25Q9UIL4 384 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 PEX16Q9Y5Y5 336 aa11.77□□□□□ -0.53
LIG1-208ENST00000595758 MEIKINA0A087WXM9 373 aa11.76□□□□□ -0.53
LIG1-208ENST00000595758 SMIM30A4D0T7 59 aa11.76□□□□□ -0.53
LIG1-208ENST00000595758 NOTOA8MTQ0 251 aa11.76□□□□□ -0.53
LIG1-208ENST00000595758 MCRIP1C9JLW8 97 aa11.76□□□□□ -0.53
LIG1-208ENST00000595758 RNASEK-C17orf49H0YIS7 233 aa11.76□□□□□ -0.53
LIG1-208ENST00000595758 AIPO00170 330 aa11.76□□□□□ -0.53
LIG1-208ENST00000595758 RBP4P02753 201 aa11.76□□□□□ -0.53
LIG1-208ENST00000595758 GLAP06280 429 aa11.76□□□□□ -0.53
LIG1-208ENST00000595758 CFPP27918 469 aa11.76□□□□□ -0.53
LIG1-208ENST00000595758 ERVFRD-1P60508 538 aa11.76□□□□□ -0.53
LIG1-208ENST00000595758 PAX5Q02548 391 aa11.76□□□□□ -0.53
LIG1-208ENST00000595758 RBM39Q14498 530 aaKnown RBP11.76□□□□□ -0.53
LIG1-208ENST00000595758 RSBN1Q5VWQ0 802 aaPredicted RBP11.76□□□□□ -0.53
LIG1-208ENST00000595758 RUSC1-AS1Q66K80 236 aa11.76□□□□□ -0.53
LIG1-208ENST00000595758 BRD3OSQ6XYD6 125 aa11.76□□□□□ -0.53
LIG1-208ENST00000595758 NR2C2APQ86WQ0 139 aa11.76□□□□□ -0.53
LIG1-208ENST00000595758 BCL6BQ8N143 479 aaPredicted RBP11.76□□□□□ -0.53
LIG1-208ENST00000595758 OR13F1Q8NGS4 319 aa11.76□□□□□ -0.53
LIG1-208ENST00000595758 PLPPR1Q8TBJ4 325 aa11.76□□□□□ -0.53
LIG1-208ENST00000595758 NEDD4LQ96PU5 975 aa11.76□□□□□ -0.53
LIG1-208ENST00000595758 SLC6A7Q99884 636 aa11.76□□□□□ -0.53
LIG1-208ENST00000595758 URM1Q9BTM9 101 aaKnown RBP11.76□□□□□ -0.53
LIG1-208ENST00000595758 TM2D1Q9BX74 207 aa11.76□□□□□ -0.53
LIG1-208ENST00000595758 HEXA-AS1Q9H8Q6 139 aa11.76□□□□□ -0.53
LIG1-208ENST00000595758 OR6C3Q9NZP0 311 aa11.76□□□□□ -0.53
LIG1-208ENST00000595758 FBLN5Q9UBX5 448 aa11.76□□□□□ -0.53
LIG1-208ENST00000595758 TMEM30CPA0ZSE6 113 aa11.75□□□□□ -0.53
LIG1-208ENST00000595758 PDCD6O75340 191 aa11.75□□□□□ -0.53
LIG1-208ENST00000595758 CLEC2LP0C7M8 214 aa11.75□□□□□ -0.53
LIG1-208ENST00000595758 SLC2A2P11168 524 aaPredicted RBP11.75□□□□□ -0.53
LIG1-208ENST00000595758 LSM3P62310 102 aaKnown RBP11.75□□□□□ -0.53
LIG1-208ENST00000595758 GUCA2AQ02747 115 aa11.75□□□□□ -0.53
LIG1-208ENST00000595758 MXD1Q05195 221 aa11.75□□□□□ -0.53
LIG1-208ENST00000595758 KLRD1Q13241 179 aa11.75□□□□□ -0.53
LIG1-208ENST00000595758 NKAPLQ5M9Q1 402 aa11.75□□□□□ -0.53
LIG1-208ENST00000595758 SIGIRRQ6IA17 410 aa11.75□□□□□ -0.53
LIG1-208ENST00000595758 SLC35E4Q6ICL7 350 aa11.75□□□□□ -0.53
LIG1-208ENST00000595758 C9orf139Q6ZV77 190 aa11.75□□□□□ -0.53
LIG1-208ENST00000595758 ZNF565Q8N9K5 539 aa11.75□□□□□ -0.53
LIG1-208ENST00000595758 ZNF418Q8TF45 676 aaPredicted RBP11.75□□□□□ -0.53
LIG1-208ENST00000595758 NICN1Q9BSH3 213 aa11.75□□□□□ -0.53
LIG1-208ENST00000595758 FUNDC2Q9BWH2 189 aa11.75□□□□□ -0.53
LIG1-208ENST00000595758 SUCNR1Q9BXA5 334 aa11.75□□□□□ -0.53
LIG1-208ENST00000595758 LPAR5Q9H1C0 372 aa11.75□□□□□ -0.53
LIG1-208ENST00000595758 GAL3ST2Q9H3Q3 398 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms