RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 ZNF780AO75290 641 aaPredicted RBP10.69□□□□□ -0.7
SCAF1-202ENST00000595242 CRTAPO75718 401 aaPredicted RBP10.69□□□□□ -0.7
SCAF1-202ENST00000595242 TSPAN15O95858 294 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 CYB5AP00167 134 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 CST4P01036 141 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 PRB2P02812 416 aaPredicted RBP10.69□□□□□ -0.7
SCAF1-202ENST00000595242 CPT2P23786 658 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 CBX5P45973 191 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 RBP2P50120 134 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 CCL8P80075 99 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 CD83Q01151 205 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 FCN2Q15485 313 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 ALKBH6Q3KRA9 238 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 PLAC9Q5JTB6 97 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 ZNF782Q6ZMW2 699 aaPredicted RBP10.69□□□□□ -0.7
SCAF1-202ENST00000595242 SLC36A1Q7Z2H8 476 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 TRAPPC6BQ86SZ2 158 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 NOXA1Q86UR1 476 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 CHST4Q8NCG5 386 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 CSNK2A3Q8NEV1 391 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 OR11H7Q8NGC8 314 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 OR4D10Q8NGI6 311 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 OR4F5Q8NH21 305 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 NPRL2Q8WTW4 380 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 CMBLQ96DG6 245 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 RAB3CQ96E17 227 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 BORCS8Q96FH0 119 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 ZNF486Q96H40 463 aaPredicted RBP10.69□□□□□ -0.7
SCAF1-202ENST00000595242 Q96M66 194 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 GAL3ST1Q99999 423 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 SLC25A21Q9BQT8 299 aaPredicted RBP10.69□□□□□ -0.7
SCAF1-202ENST00000595242 SELENOIQ9C0D9 397 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 MS4A7Q9GZW8 240 aaPredicted RBP10.69□□□□□ -0.7
SCAF1-202ENST00000595242 METTL9Q9H1A3 318 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 ELF5Q9UKW6 265 aaPredicted RBP10.69□□□□□ -0.7
SCAF1-202ENST00000595242 FLVCR2Q9UPI3 526 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 KCNK7Q9Y2U2 307 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 AUP1Q9Y679 476 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 TENM3Q9P273 2699 aa10.69□□□□□ -0.7
SCAF1-202ENST00000595242 PPIAL4EA0A075B759 164 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 PPIAL4CA0A0B4J2A2 164 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 A0A1W2PP11 408 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 C5orf49A4QMS7 147 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 MEIS3P1A6NDR6 274 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 FAM181BA6NEQ2 426 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 SERPINE3A8MV23 424 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 PPIAL4DF5H284 164 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 PPIAL4FP0DN26 164 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 CD79AP11912 226 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 ZNF35P13682 527 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 ERP29P30040 261 aaKnown RBP10.68□□□□□ -0.7
SCAF1-202ENST00000595242 APLNRP35414 380 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 ATP1B3P54709 279 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 MTCP1P56278 107 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 KRTAP10-3P60369 221 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 MALLQ13021 153 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 CBX3Q13185 183 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 GK2Q14410 553 aaPredicted RBP10.68□□□□□ -0.7
SCAF1-202ENST00000595242 TAF9Q16594 264 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 BEAN1Q3B7T3 259 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 SLC22A6Q4U2R8 563 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 ACTBL2Q562R1 376 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 ZNF626Q68DY1 528 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 ZSCAN4Q8NAM6 433 aaPredicted RBP10.68□□□□□ -0.7
SCAF1-202ENST00000595242 Q8NFD4 153 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 OR51S1Q8NGJ8 323 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 FAM110DQ8TAY7 271 aaPredicted RBP10.68□□□□□ -0.7
SCAF1-202ENST00000595242 NUDCD2Q8WVJ2 157 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 ST8SIA4Q92187 359 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 MRPS24Q96EL2 167 aaKnown RBP10.68□□□□□ -0.7
SCAF1-202ENST00000595242 TIMD4Q96H15 378 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 MS4A3Q96HJ5 214 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 S100A13Q99584 98 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 OCSTAMPQ9BR26 566 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 GINS4Q9BRT9 223 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 BANF2Q9H503 90 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 GPN1Q9HCN4 374 aaPredicted RBP10.68□□□□□ -0.7
SCAF1-202ENST00000595242 MMP26Q9NRE1 261 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 PTTG3PQ9NZH4 202 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 PURGQ9UJV8 347 aaKnown RBP10.68□□□□□ -0.7
SCAF1-202ENST00000595242 ING4Q9UNL4 249 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 SLC7A11Q9UPY5 501 aa10.68□□□□□ -0.7
SCAF1-202ENST00000595242 MEIKINA0A087WXM9 373 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 IGHV1-69-2A0A0G2JMI3 117 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 CLPSL1A2RUU4 121 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 C17orf100A8MU93 164 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 DISC1C4P0D8 188 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 C3orf80F5H4A9 247 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 CRYBA1P05813 215 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 ANXA3P12429 323 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 GNB3P16520 340 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 SELEP16581 610 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 ZNF14P17017 642 aaPredicted RBP10.67□□□□□ -0.7
SCAF1-202ENST00000595242 WNT5AP41221 380 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 GNG2P59768 71 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 RPS23P62266 143 aaKnown RBP10.67□□□□□ -0.7
SCAF1-202ENST00000595242 ZNF154Q13106 437 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 NKPD1Q17RQ9 610 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 VAX1Q5SQQ9 334 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 MRPL21Q7Z2W9 205 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms