RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 MDS2Q8NDY4 140 aa13.33□□□□□ -0.28
PNKP-204ENST00000594661 LFNGQ8NES3 379 aa13.33□□□□□ -0.28
PNKP-204ENST00000594661 ZNF845Q96IR2 970 aaPredicted RBP13.33□□□□□ -0.28
PNKP-204ENST00000594661 SYT3Q9BQG1 590 aa13.33□□□□□ -0.28
PNKP-204ENST00000594661 SF3B5Q9BWJ5 86 aaKnown RBP13.33□□□□□ -0.28
PNKP-204ENST00000594661 CBLN4Q9NTU7 201 aa13.33□□□□□ -0.28
PNKP-204ENST00000594661 FOXD3Q9UJU5 478 aaPredicted RBP13.33□□□□□ -0.28
PNKP-204ENST00000594661 CNOT1A5YKK6 2376 aaKnown RBP13.33□□□□□ -0.28
PNKP-204ENST00000594661 ZNF716A6NP11 495 aa13.33□□□□□ -0.28
PNKP-204ENST00000594661 H3BQ15 152 aa13.33□□□□□ -0.28
PNKP-204ENST00000594661 NKX2-8O15522 239 aa13.33□□□□□ -0.28
PNKP-204ENST00000594661 TK1P04183 234 aa13.33□□□□□ -0.28
PNKP-204ENST00000594661 HPNP05981 417 aa13.33□□□□□ -0.28
PNKP-204ENST00000594661 SEC11BP0C7V7 166 aa13.33□□□□□ -0.28
PNKP-204ENST00000594661 GLIPR1P48060 266 aa13.33□□□□□ -0.28
PNKP-204ENST00000594661 ZNF133P52736 654 aaPredicted RBP13.33□□□□□ -0.28
PNKP-204ENST00000594661 RAB32Q13637 225 aa13.33□□□□□ -0.28
PNKP-204ENST00000594661 ZNF774Q6NX45 483 aa13.33□□□□□ -0.28
PNKP-204ENST00000594661 GALNTL5Q7Z4T8 443 aa13.33□□□□□ -0.28
PNKP-204ENST00000594661 SEMA6DQ8NFY4 1073 aa13.33□□□□□ -0.28
PNKP-204ENST00000594661 OR4S1Q8NGB4 309 aa13.33□□□□□ -0.28
PNKP-204ENST00000594661 SNIP1Q8TAD8 396 aaKnown RBP13.33□□□□□ -0.28
PNKP-204ENST00000594661 OR51E1Q8TCB6 317 aa13.33□□□□□ -0.28
PNKP-204ENST00000594661 B4GALT7Q9UBV7 327 aa13.33□□□□□ -0.28
PNKP-204ENST00000594661 ZFHX2Q9C0A1 2572 aaPredicted RBP13.32□□□□□ -0.28
PNKP-204ENST00000594661 SP1P08047 785 aa13.32□□□□□ -0.28
PNKP-204ENST00000594661 ZNF616Q08AN1 781 aa13.32□□□□□ -0.28
PNKP-204ENST00000594661 C1orf100Q5SVJ3 147 aa13.32□□□□□ -0.28
PNKP-204ENST00000594661 COMMD2Q86X83 199 aa13.32□□□□□ -0.28
PNKP-204ENST00000594661 OR4D6Q8NGJ1 314 aa13.32□□□□□ -0.28
PNKP-204ENST00000594661 C22orf15Q8WYQ4 148 aa13.32□□□□□ -0.28
PNKP-204ENST00000594661 ADAT3Q96EY9 351 aaPredicted RBP13.32□□□□□ -0.28
PNKP-204ENST00000594661 C2orf50Q96LR7 162 aa13.32□□□□□ -0.28
PNKP-204ENST00000594661 MOB1AQ9H8S9 216 aa13.32□□□□□ -0.28
PNKP-204ENST00000594661 PNRC2Q9NPJ4 139 aaKnown RBP13.32□□□□□ -0.28
PNKP-204ENST00000594661 FBXL17Q9UF56 701 aa13.32□□□□□ -0.28
PNKP-204ENST00000594661 STRAPQ9Y3F4 350 aaKnown RBP13.32□□□□□ -0.28
PNKP-204ENST00000594661 LOC400499M0QZD8 3231 aa13.32□□□□□ -0.28
PNKP-204ENST00000594661 MUC6Q6W4X9 2439 aa13.32□□□□□ -0.28
PNKP-204ENST00000594661 KIR2DL5BA0A0G2JN68 375 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 KIR2DL5BA0A0G2JPC4 375 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 A6NNC1 897 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 ZNF705GA8MUZ8 300 aaPredicted RBP13.31□□□□□ -0.28
PNKP-204ENST00000594661 HSPA12AO43301 675 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 WT1P19544 449 aaPredicted RBP13.31□□□□□ -0.28
PNKP-204ENST00000594661 ZNF121P58317 390 aaPredicted RBP13.31□□□□□ -0.28
PNKP-204ENST00000594661 PMPCAQ10713 525 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 HERPUD1Q15011 391 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 COA6Q5JTJ3 125 aaKnown RBP13.31□□□□□ -0.28
PNKP-204ENST00000594661 C20orf196Q8IYI0 205 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 KIR2DL5AQ8N109 375 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 TMEM251Q8N6I4 163 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 OR10A7Q8NGE5 316 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 NABP1Q96AH0 204 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 ZNF837Q96EG3 531 aaPredicted RBP13.31□□□□□ -0.28
PNKP-204ENST00000594661 PARP12Q9H0J9 701 aaKnown RBP13.31□□□□□ -0.28
PNKP-204ENST00000594661 DHHO43323 396 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 OR5H8P0DN80 308 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 GUCA1AP43080 201 aaPredicted RBP13.31□□□□□ -0.28
PNKP-204ENST00000594661 CAMLGP49069 296 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 MEOX1P50221 254 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 LHX2P50458 406 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 UBE2KP61086 200 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 TMEM128Q5BJH2 165 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 FOXL2NBQ6ZUU3 175 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 CPEB3Q8NE35 698 aaKnown RBP13.31□□□□□ -0.28
PNKP-204ENST00000594661 OR52N4Q8NGI2 321 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 FAM210BQ96KR6 192 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 SNX22Q96L94 193 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 RBM24Q9BX46 236 aaKnown RBP13.31□□□□□ -0.28
PNKP-204ENST00000594661 ULBP2Q9BZM5 246 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 CNTD2Q9H8S5 307 aa13.31□□□□□ -0.28
PNKP-204ENST00000594661 K7EPK0 472 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 LDLRAD4O15165 306 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 ZNF20P17024 532 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 TBPP20226 339 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 MSR1P21757 451 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 ANOS1P23352 680 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 RPL12P30050 165 aaKnown RBP13.3□□□□□ -0.28
PNKP-204ENST00000594661 NOVA1P51513 510 aaKnown RBP13.3□□□□□ -0.28
PNKP-204ENST00000594661 PLGLB1Q02325 96 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 HYAL4Q2M3T9 481 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 ABHD12BQ7Z5M8 362 aaPredicted RBP13.3□□□□□ -0.28
PNKP-204ENST00000594661 HOGA1Q86XE5 327 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 LYPD6Q86Y78 171 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 FAM71E2Q8N5Q1 922 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 SLC35G3Q8N808 338 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 OR8B12Q8NGG6 310 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 OR5D14Q8NGL3 314 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 OR13C9Q8NGT0 318 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 ABHD3Q8WU67 409 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 PRRX2Q99811 253 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 KLF13Q9Y2Y9 288 aaPredicted RBP13.3□□□□□ -0.28
PNKP-204ENST00000594661 URGCP-MRPS24S4R325 110 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 CFAP47Q6ZTR5 3102 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 RIF1Q5UIP0 2472 aaKnown RBP13.3□□□□□ -0.28
PNKP-204ENST00000594661 HSD17B6O14756 317 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 TM4SF5O14894 197 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 SFT2D2O95562 160 aa13.3□□□□□ -0.28
PNKP-204ENST00000594661 PGA5P0DJD9 388 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms