RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 DGCR2P98153 550 aa17.69■□□□□ 0.42
R3HDM4-204ENST00000589428 ATAD3CQ5T2N8 411 aa17.69■□□□□ 0.42
R3HDM4-204ENST00000589428 BRICD5Q6PL45 260 aa17.69■□□□□ 0.42
R3HDM4-204ENST00000589428 Q8N402 240 aa17.69■□□□□ 0.42
R3HDM4-204ENST00000589428 GDPD1Q8N9F7 314 aa17.69■□□□□ 0.42
R3HDM4-204ENST00000589428 SULT4A1Q9BR01 284 aa17.69■□□□□ 0.42
R3HDM4-204ENST00000589428 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.69■□□□□ 0.42
R3HDM4-204ENST00000589428 PLEKHJ1Q9NW61 149 aa17.69■□□□□ 0.42
R3HDM4-204ENST00000589428 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.68■□□□□ 0.422e-6■■■□□ 19.2
R3HDM4-204ENST00000589428 MEIOCA2RUB1 952 aa17.68■□□□□ 0.42
R3HDM4-204ENST00000589428 SH2D1BO14796 132 aa17.68■□□□□ 0.42
R3HDM4-204ENST00000589428 CTDSPLO15194 276 aa17.68■□□□□ 0.42
R3HDM4-204ENST00000589428 GSTP1P09211 210 aaKnown RBP17.68■□□□□ 0.42
R3HDM4-204ENST00000589428 ZNF44P15621 663 aa17.68■□□□□ 0.42
R3HDM4-204ENST00000589428 RNASE12Q5GAN4 147 aaKnown RBP17.68■□□□□ 0.42
R3HDM4-204ENST00000589428 C15orf40Q8WUR7 153 aa17.68■□□□□ 0.42
R3HDM4-204ENST00000589428 YAE1D1Q9NRH1 226 aa17.68■□□□□ 0.42
R3HDM4-204ENST00000589428 ZNF222Q9UK12 451 aa17.68■□□□□ 0.42
R3HDM4-204ENST00000589428 KCNS2Q9ULS6 477 aa17.68■□□□□ 0.42
R3HDM4-204ENST00000589428 SIRPB1O00241 398 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 DEGS1O15121 323 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 ADAM20O43506 726 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 FOXH1O75593 365 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 MELTFP08582 738 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 WNT2P09544 360 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 GUCA2AQ02747 115 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 STUMQ69YW2 141 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 LYPD2Q6UXB3 125 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 GLCCI1Q86VQ1 547 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 CD177Q8N6Q3 437 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 ANGPTL6Q8NI99 470 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 SMIM4Q8WVI0 70 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 SPACA1Q9HBV2 294 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 NKX6-3A6NJ46 265 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 SLC33A1O00400 549 aaPredicted RBP17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 HSPB6O14558 160 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 SEC61A1P61619 476 aaKnown RBP17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 BAK1Q16611 211 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 HACD4Q5VWC8 232 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 SUMF2Q8NBJ7 301 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 NUDCD2Q8WVJ2 157 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 FAAP24Q9BTP7 215 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 SSBP3Q9BWW4 388 aaPredicted RBP17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 GLS2Q9UI32 602 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 METRNQ9UJH8 293 aa17.67■□□□□ 0.42
R3HDM4-204ENST00000589428 MTORP42345 2549 aa17.66■□□□□ 0.42
R3HDM4-204ENST00000589428 SERPINE3A8MV23 424 aa17.66■□□□□ 0.42
R3HDM4-204ENST00000589428 A8MV72 311 aaPredicted RBP17.66■□□□□ 0.42
R3HDM4-204ENST00000589428 TMPRSS2O15393 492 aa17.66■□□□□ 0.42
R3HDM4-204ENST00000589428 PRDX2P32119 198 aa17.66■□□□□ 0.42
R3HDM4-204ENST00000589428 PRSS3P35030 304 aa17.66■□□□□ 0.42
R3HDM4-204ENST00000589428 GNB2P62879 340 aa17.66■□□□□ 0.42
R3HDM4-204ENST00000589428 ARL6IP1Q15041 203 aa17.66■□□□□ 0.42
R3HDM4-204ENST00000589428 SLC36A1Q7Z2H8 476 aa17.66■□□□□ 0.42
R3HDM4-204ENST00000589428 OR52I2Q8NH67 350 aa17.66■□□□□ 0.42
R3HDM4-204ENST00000589428 DYRK2Q92630 601 aa17.66■□□□□ 0.42
R3HDM4-204ENST00000589428 BORCS5Q969J3 196 aa17.66■□□□□ 0.42
R3HDM4-204ENST00000589428 TMEM186Q96B77 213 aa17.66■□□□□ 0.42
R3HDM4-204ENST00000589428 CCDC32Q9BV29 185 aa17.66■□□□□ 0.42
R3HDM4-204ENST00000589428 DPCDQ9BVM2 203 aaPredicted RBP17.66■□□□□ 0.42
R3HDM4-204ENST00000589428 CLN8Q9UBY8 286 aa17.66■□□□□ 0.42
R3HDM4-204ENST00000589428 TRAV20A0A0B4J274 112 aa17.65■□□□□ 0.42
R3HDM4-204ENST00000589428 H3BUI4 141 aa17.65■□□□□ 0.42
R3HDM4-204ENST00000589428 GABARAPH6UMI1 98 aa17.65■□□□□ 0.42
R3HDM4-204ENST00000589428 GSTZ1O43708 216 aaPredicted RBP17.65■□□□□ 0.42
R3HDM4-204ENST00000589428 AMY2BP19961 511 aa17.65■□□□□ 0.42
R3HDM4-204ENST00000589428 LMO1P25800 156 aa17.65■□□□□ 0.42
R3HDM4-204ENST00000589428 DVL1P1P54792 670 aaPredicted RBP17.65■□□□□ 0.42
R3HDM4-204ENST00000589428 LCN2P80188 198 aa17.65■□□□□ 0.42
R3HDM4-204ENST00000589428 MRPS10P82664 201 aaKnown RBP17.65■□□□□ 0.42
R3HDM4-204ENST00000589428 BPIFB2Q8N4F0 458 aa17.65■□□□□ 0.42
R3HDM4-204ENST00000589428 TRIM63Q969Q1 353 aa17.65■□□□□ 0.42
R3HDM4-204ENST00000589428 DNTTIP1Q9H147 329 aa17.65■□□□□ 0.42
R3HDM4-204ENST00000589428 SEBOXQ9HB31 216 aaPredicted RBP17.65■□□□□ 0.42
R3HDM4-204ENST00000589428 AK3Q9UIJ7 227 aa17.65■□□□□ 0.42
R3HDM4-204ENST00000589428 HIVEP2P31629 2446 aa17.65■□□□□ 0.42
R3HDM4-204ENST00000589428 UBE2QL1A1L167 161 aa17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 A8MXK9 166 aa17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 LANCL1O43813 399 aa17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 SSX5O60225 188 aa17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 PSPNO60542 156 aa17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 CD3GP09693 182 aa17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 NPY4RP50391 375 aa17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 COL10A1Q03692 680 aa17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 PNLIPRP3Q17RR3 467 aa17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 PAN3Q58A45 887 aaKnown RBP17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 OR8H2Q8N162 312 aa17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 GPX8Q8TED1 209 aa17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 CCL13Q99616 98 aa17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 HIF1ANQ9NWT6 349 aa17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 KAAG1Q9UBP8 84 aa17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 CTSZQ9UBR2 303 aa17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 TMEM82A0PJX8 343 aa17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 TNFRSF13BO14836 293 aaPredicted RBP17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 PHF1O43189 567 aaPredicted RBP17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 LPLP06858 475 aa17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 IL7P13232 177 aa17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 GABRA2P47869 451 aa17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 GNG2P59768 71 aa17.64■□□□□ 0.41
R3HDM4-204ENST00000589428 FCAMRQ8WWV6 532 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms