RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 CMTM1Q8IZ96 169 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 COMMD1Q8N668 190 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 BOLLQ8N9W6 283 aaKnown RBP6.37□□□□□ -1.39
ZNF540-206ENST00000589117 UBAC2Q8NBM4 344 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 OR56B2PQ8NGI1 322 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 FGFBP3Q8TAT2 258 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 NEK7Q8TDX7 302 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 HRH4Q9H3N8 390 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 PARP11Q9NR21 331 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 MPC1Q9Y5U8 109 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 PMS2P1A4D2B8 440 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 H7C1Q1 480 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 H7C2Y5 167 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 PHF1O43189 567 aaPredicted RBP6.36□□□□□ -1.39
ZNF540-206ENST00000589117 GPR137BO60478 399 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 MED6O75586 246 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 CDS2O95674 445 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 MT-CO3P00414 261 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 PPYP01298 95 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 GLAP06280 429 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 IL32P24001 234 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 MAGEA5P43359 124 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 P2RY1P47900 373 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 GPM6AP51674 278 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 RSPO4Q2I0M5 234 aaPredicted RBP6.36□□□□□ -1.39
ZNF540-206ENST00000589117 PHLDA2Q53GA4 152 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 RPL7L1Q6DKI1 246 aaKnown RBP6.36□□□□□ -1.39
ZNF540-206ENST00000589117 GTF3AQ92664 365 aaKnown RBP6.36□□□□□ -1.39
ZNF540-206ENST00000589117 EXTL1Q92935 676 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 TCEAL3Q969E4 200 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 RAB24Q969Q5 203 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 MRPL24Q96A35 216 aaKnown RBP6.36□□□□□ -1.39
ZNF540-206ENST00000589117 SIGLEC12Q96PQ1 595 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 AIFM2Q9BRQ8 373 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 MS4A7Q9GZW8 240 aaPredicted RBP6.36□□□□□ -1.39
ZNF540-206ENST00000589117 RHOFQ9HBH0 211 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 UBE2J1Q9Y385 318 aaPredicted RBP6.36□□□□□ -1.39
ZNF540-206ENST00000589117 ATP23Q9Y6H3 246 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 X6R8D5 127 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 SDK2Q58EX2 2172 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 C3orf85A0A1B0GTC6 90 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 DUXBA0A1W2PPF3 345 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 LNP1A1A4G5 178 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 OR5B21A6NL26 309 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 FAM166BA8MTA8 275 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 TOR1AO14656 332 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 MPPED1O15442 326 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 TSPAN9O75954 239 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 HLA-HP01893 362 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 SP1P08047 785 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 SEC11BP0C7V7 166 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 HMGN3Q15651 99 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 SP6Q3SY56 376 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 SMUG1Q53HV7 270 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 SPIN3Q5JUX0 258 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 LCE2AQ5TA79 106 aaPredicted RBP6.36□□□□□ -1.39
ZNF540-206ENST00000589117 MBNL2Q5VZF2 373 aaKnown RBP6.36□□□□□ -1.39
ZNF540-206ENST00000589117 HAGHLQ6PII5 290 aaPredicted RBP6.36□□□□□ -1.39
ZNF540-206ENST00000589117 LINC00696Q6ZRV3 163 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 CALHM1Q8IU99 346 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 ZNF695Q8IW36 515 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 TMEM251Q8N6I4 163 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 GLYATL2Q8WU03 294 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 JMJD8Q96S16 334 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 UQCC1Q9NVA1 299 aa6.36□□□□□ -1.39
ZNF540-206ENST00000589117 CARHSP1Q9Y2V2 147 aaKnown RBP6.36□□□□□ -1.39
ZNF540-206ENST00000589117 KIAA1549Q9HCM3 1950 aa6.35□□□□□ -1.39
ZNF540-206ENST00000589117 ZNF732B4DXR9 585 aa6.35□□□□□ -1.39
ZNF540-206ENST00000589117 ABCD4O14678 606 aa6.35□□□□□ -1.39
ZNF540-206ENST00000589117 NUPL2O15504 423 aaKnown RBP6.35□□□□□ -1.39
ZNF540-206ENST00000589117 MBPP02686 304 aaPredicted RBP6.35□□□□□ -1.39
ZNF540-206ENST00000589117 SP9P0CG40 484 aa6.35□□□□□ -1.39
ZNF540-206ENST00000589117 AADACP22760 399 aa6.35□□□□□ -1.39
ZNF540-206ENST00000589117 RFC3P40938 356 aa6.35□□□□□ -1.39
ZNF540-206ENST00000589117 GNG3P63215 75 aa6.35□□□□□ -1.39
ZNF540-206ENST00000589117 TGFBR3Q03167 851 aa6.35□□□□□ -1.39
ZNF540-206ENST00000589117 C9orf135Q5VTT2 229 aa6.35□□□□□ -1.39
ZNF540-206ENST00000589117 LYZL2Q7Z4W2 148 aa6.35□□□□□ -1.39
ZNF540-206ENST00000589117 ABHD14BQ96IU4 210 aa6.35□□□□□ -1.39
ZNF540-206ENST00000589117 C18orf12Q96KH6 178 aa6.35□□□□□ -1.39
ZNF540-206ENST00000589117 SLC25A31Q9H0C2 315 aa6.35□□□□□ -1.39
ZNF540-206ENST00000589117 FOXJ2Q9P0K8 574 aa6.35□□□□□ -1.39
ZNF540-206ENST00000589117 FBXL17Q9UF56 701 aa6.35□□□□□ -1.39
ZNF540-206ENST00000589117 PURGQ9UJV8 347 aaKnown RBP6.35□□□□□ -1.39
ZNF540-206ENST00000589117 LRP5LA4QPB2 252 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 CD300LBA8K4G0 201 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 PRSS47A8MTI9 375 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 TRDCB7Z8K6 153 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 GPR31O00270 319 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 NME2P1O60361 137 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 TSPAN15O95858 294 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 NPBWR2P48146 333 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 MEOX1P50221 254 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 DVL1P1P54792 670 aaPredicted RBP6.34□□□□□ -1.39
ZNF540-206ENST00000589117 RND3P61587 244 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 ZNF266Q14584 549 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 C10orf91Q5T1B1 145 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 OR2A2Q6IF42 318 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 TMEM105Q8N8V8 129 aa6.34□□□□□ -1.39
ZNF540-206ENST00000589117 TMEM178AQ8NBL3 297 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms