RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 GABRPO00591 440 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 MPZL2O60487 215 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 AMY1AP04745 511 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 AMY2AP04746 511 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 RAB3AP20336 220 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 MTNR1BP49286 362 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 PRRX1P54821 245 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 RAB40BQ12829 278 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 SMN1Q16637 294 aaKnown RBP11.44□□□□□ -0.58
VMP1-206ENST00000587945 LTC4SQ16873 150 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 PIGYQ3MUY2 71 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 PAN3Q58A45 887 aaKnown RBP11.44□□□□□ -0.58
VMP1-206ENST00000587945 XAF1Q6GPH4 301 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 C16orf82Q7Z2V1 217 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 CENPVQ7Z7K6 275 aaPredicted RBP11.44□□□□□ -0.58
VMP1-206ENST00000587945 OR51T1Q8NGJ9 327 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 OR13A1Q8NGR1 328 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 TNFAIP8L1Q8WVP5 186 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 KIRREL1Q96J84 757 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 AKR1E2Q96JD6 320 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 RBM14Q96PK6 669 aaKnown RBP11.44□□□□□ -0.58
VMP1-206ENST00000587945 MYCBPQ99417 103 aaPredicted RBP11.44□□□□□ -0.58
VMP1-206ENST00000587945 GPER1Q99527 375 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 FAM192AQ9GZU8 254 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 S100A14Q9HCY8 104 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 FAM118AQ9NWS6 357 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 CALYQ9NYX4 217 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 OR6C3Q9NZP0 311 aa11.44□□□□□ -0.58
VMP1-206ENST00000587945 A0A087X0M5 115 aa11.43□□□□□ -0.58
VMP1-206ENST00000587945 TRAV39A0A0B4J263 110 aa11.43□□□□□ -0.58
VMP1-206ENST00000587945 A0A1B0GX30 115 aa11.43□□□□□ -0.58
VMP1-206ENST00000587945 OR2F2O95006 317 aa11.43□□□□□ -0.58
VMP1-206ENST00000587945 LIMS3P0CW19 117 aa11.43□□□□□ -0.58
VMP1-206ENST00000587945 LIMS4P0CW20 117 aa11.43□□□□□ -0.58
VMP1-206ENST00000587945 CGB3P0DN86 165 aa11.43□□□□□ -0.58
VMP1-206ENST00000587945 CGB7P0DN87 165 aa11.43□□□□□ -0.58
VMP1-206ENST00000587945 CEACAM3P40198 252 aa11.43□□□□□ -0.58
VMP1-206ENST00000587945 ARHGDIBP52566 201 aa11.43□□□□□ -0.58
VMP1-206ENST00000587945 MRPL28Q13084 256 aaKnown RBP11.43□□□□□ -0.58
VMP1-206ENST00000587945 C9orf152Q5JTZ5 239 aa11.43□□□□□ -0.58
VMP1-206ENST00000587945 ELP2Q6IA86 826 aa11.43□□□□□ -0.58
VMP1-206ENST00000587945 ZNF529Q6P280 563 aa11.43□□□□□ -0.58
VMP1-206ENST00000587945 PQLC1Q8N2U9 271 aa11.43□□□□□ -0.58
VMP1-206ENST00000587945 PXT1Q8NFP0 134 aa11.43□□□□□ -0.58
VMP1-206ENST00000587945 RFESDQ8TAC1 157 aa11.43□□□□□ -0.58
VMP1-206ENST00000587945 CNIH3Q8TBE1 160 aa11.43□□□□□ -0.58
VMP1-206ENST00000587945 PLPPR1Q8TBJ4 325 aa11.43□□□□□ -0.58
VMP1-206ENST00000587945 SGCDQ92629 289 aa11.43□□□□□ -0.58
VMP1-206ENST00000587945 PHF21AQ96BD5 680 aa11.43□□□□□ -0.58
VMP1-206ENST00000587945 JAM3Q9BX67 310 aa11.43□□□□□ -0.58
VMP1-206ENST00000587945 MRPS18AQ9NVS2 196 aaKnown RBP11.43□□□□□ -0.58
VMP1-206ENST00000587945 RPL36Q9Y3U8 105 aaKnown RBP11.43□□□□□ -0.58
VMP1-206ENST00000587945 TCRBV4S1A1TA0A5B7 111 aa11.42□□□□□ -0.58
VMP1-206ENST00000587945 MAGEB3O15480 346 aa11.42□□□□□ -0.58
VMP1-206ENST00000587945 HTR3BO95264 441 aa11.42□□□□□ -0.58
VMP1-206ENST00000587945 RPSAP08865 295 aaKnown RBP11.42□□□□□ -0.58
VMP1-206ENST00000587945 PF4V1P10720 104 aa11.42□□□□□ -0.58
VMP1-206ENST00000587945 IGLL1P15814 213 aa11.42□□□□□ -0.58
VMP1-206ENST00000587945 MNDAP41218 407 aa11.42□□□□□ -0.58
VMP1-206ENST00000587945 ETV1P50549 477 aa11.42□□□□□ -0.58
VMP1-206ENST00000587945 DIAPH2-AS1Q14236 149 aa11.42□□□□□ -0.58
VMP1-206ENST00000587945 RSU1Q15404 277 aa11.42□□□□□ -0.58
VMP1-206ENST00000587945 ZNF565Q8N9K5 539 aa11.42□□□□□ -0.58
VMP1-206ENST00000587945 OR9G1Q8NH87 305 aa11.42□□□□□ -0.58
VMP1-206ENST00000587945 MRAPQ8TCY5 172 aa11.42□□□□□ -0.58
VMP1-206ENST00000587945 MRGPRDQ8TDS7 321 aa11.42□□□□□ -0.58
VMP1-206ENST00000587945 MYDGFQ969H8 173 aa11.42□□□□□ -0.58
VMP1-206ENST00000587945 RPEQ96AT9 228 aa11.42□□□□□ -0.58
VMP1-206ENST00000587945 CREB3L1Q96BA8 519 aa11.42□□□□□ -0.58
VMP1-206ENST00000587945 IDI2-AS1Q9NZ38 188 aa11.42□□□□□ -0.58
VMP1-206ENST00000587945 SIRT4Q9Y6E7 314 aaPredicted RBP11.42□□□□□ -0.58
VMP1-206ENST00000587945 DSCAML1Q8TD84 2053 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 J3QR06 171 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 PIN1P1O15428 100 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 WBP4O75554 376 aaKnown RBP11.41□□□□□ -0.58
VMP1-206ENST00000587945 CDRT1O95170 752 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 BAG2O95816 211 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 IL1AP01583 271 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 CD33P20138 364 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 GNG10P50151 68 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 IL13RA2Q14627 380 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 KLHL22Q53GT1 634 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 OR2G6Q5TZ20 316 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 RSBN1Q5VWQ0 802 aaPredicted RBP11.41□□□□□ -0.58
VMP1-206ENST00000587945 FOXB2Q5VYV0 432 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 CCDC144NLQ6NUI1 221 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 REC114Q7Z4M0 266 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 OR56B4Q8NH76 319 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 GPR148Q8TDV2 347 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 TOMM40LQ969M1 308 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 ORAI1Q96D31 301 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 BARHL1Q9BZE3 327 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 FGF20Q9NP95 211 aaPredicted RBP11.41□□□□□ -0.58
VMP1-206ENST00000587945 NECAP2Q9NVZ3 263 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 AURKAIP1Q9NWT8 199 aaPredicted RBP11.41□□□□□ -0.58
VMP1-206ENST00000587945 ING4Q9UNL4 249 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 PSG11Q9UQ72 335 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 PLXNB1O43157 2135 aa11.41□□□□□ -0.58
VMP1-206ENST00000587945 A0A1W2PPE3 182 aa11.4□□□□□ -0.58
VMP1-206ENST00000587945 OOSP1A8MZH6 123 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms