RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 PBOV1Q9GZY1 135 aa8.39□□□□□ -1.07
LINC01539-201ENST00000587904 PNRC2Q9NPJ4 139 aaKnown RBP8.39□□□□□ -1.07
LINC01539-201ENST00000587904 MTFP1Q9UDX5 166 aa8.39□□□□□ -1.07
LINC01539-201ENST00000587904 A0A1B0GW64 132 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 FAM221AA4D161 298 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 GLSO94925 669 aaPredicted RBP8.38□□□□□ -1.07
LINC01539-201ENST00000587904 TTRP02766 147 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 SP1P08047 785 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 SELEP16581 610 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 CHATP28329 748 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 RAB7AP51149 207 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 HIST1H3AP68431 136 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 LINC00696Q6ZRV3 163 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 SLC35E3Q7Z769 313 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 CPT1CQ8TCG5 803 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 NABP1Q96AH0 204 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 SMIM12Q96EX1 92 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 CLUHP3Q96NS8 147 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 RNF2Q99496 336 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 C20orf24Q9BUV8 137 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 OR2J1Q9GZK6 312 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 GSKIPQ9P0R6 139 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 AMDHD2Q9Y303 409 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 KNTC1P50748 2209 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 NCKAP5O14513 1909 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 IGKV3D-15A0A087WSY6 115 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 PPP5D1E7EU14 171 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 TAAR5O14804 337 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 SCAF4O95104 1147 aaKnown RBP8.38□□□□□ -1.07
LINC01539-201ENST00000587904 TRGC2P03986 189 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 CCL1P22362 96 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 SNCAP37840 140 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 PLGLB1Q02325 96 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 ATXN7L3Q14CW9 347 aaPredicted RBP8.38□□□□□ -1.07
LINC01539-201ENST00000587904 RNF151Q2KHN1 245 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 FAM27BQ5VT28 67 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 ASPHD2Q6ICH7 369 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 FAM166AQ6J272 317 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 TEX38Q6PEX7 206 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 PRSS57Q6UWY2 283 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 MEX3BQ6ZN04 569 aaKnown RBP8.38□□□□□ -1.07
LINC01539-201ENST00000587904 AAED1Q7RTV5 226 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 MYPOPQ86VE0 399 aaPredicted RBP8.38□□□□□ -1.07
LINC01539-201ENST00000587904 OR14K1Q8NGZ2 314 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 SYNPRQ8TBG9 265 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 ABHD5Q8WTS1 349 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 Q8WTZ3 238 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 VPS25Q9BRG1 176 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 SCRT1Q9BWW7 348 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 SLC35B3Q9H1N7 401 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 POFUT1Q9H488 388 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 KCNJ16Q9NPI9 418 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 TAS2R4Q9NYW5 299 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 MMP24Q9Y5R2 645 aa8.38□□□□□ -1.07
LINC01539-201ENST00000587904 A0A0B4J2A0 478 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 LOC100289279A0A1B0GTE1 492 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 P2RY10O00398 339 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 CCL25O15444 150 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 TOMM40O96008 361 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 ERCC1P07992 297 aaPredicted RBP8.37□□□□□ -1.07
LINC01539-201ENST00000587904 CXCL1P09341 107 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 CEACAM1P13688 526 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 ZNF708P17019 499 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 RPL29P47914 159 aaKnown RBP8.37□□□□□ -1.07
LINC01539-201ENST00000587904 CX3CR1P49238 355 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 MEOX1P50221 254 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 LHX2P50458 406 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 TNFSF10P50591 281 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 CLDN15P56746 228 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 TAS2R20P59543 309 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 RANP62826 216 aaKnown RBP8.37□□□□□ -1.07
LINC01539-201ENST00000587904 RPL19P84098 196 aaKnown RBP8.37□□□□□ -1.07
LINC01539-201ENST00000587904 UBE2V1Q13404 147 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 MRPL49Q13405 166 aaKnown RBP8.37□□□□□ -1.07
LINC01539-201ENST00000587904 ENDOGQ14249 297 aaKnown RBP8.37□□□□□ -1.07
LINC01539-201ENST00000587904 NRN1LQ496H8 165 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 PHYHD1Q5SRE7 291 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 C1orf87Q8N0U7 546 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 ZFP62Q8NB50 900 aaPredicted RBP8.37□□□□□ -1.07
LINC01539-201ENST00000587904 TMEM178AQ8NBL3 297 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 FRZBQ92765 325 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 PPP1R14AQ96A00 147 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 RAB39BQ96DA2 213 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 PHB2Q99623 299 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 C20orf144Q9BQM9 153 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 MIEN1Q9BRT3 115 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 RBM24Q9BX46 236 aaKnown RBP8.37□□□□□ -1.07
LINC01539-201ENST00000587904 AURKAIP1Q9NWT8 199 aaPredicted RBP8.37□□□□□ -1.07
LINC01539-201ENST00000587904 SHPKQ9UHJ6 478 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 CACNA1CQ13936 2221 aa8.37□□□□□ -1.07
LINC01539-201ENST00000587904 TRAV39A0A0B4J263 110 aa8.36□□□□□ -1.07
LINC01539-201ENST00000587904 RER1O15258 196 aa8.36□□□□□ -1.07
LINC01539-201ENST00000587904 SYNGR4O95473 234 aa8.36□□□□□ -1.07
LINC01539-201ENST00000587904 LYL1P12980 280 aa8.36□□□□□ -1.07
LINC01539-201ENST00000587904 CHRNB4P30926 498 aa8.36□□□□□ -1.07
LINC01539-201ENST00000587904 CDC34P49427 236 aaPredicted RBP8.36□□□□□ -1.07
LINC01539-201ENST00000587904 CLDN18P56856 261 aa8.36□□□□□ -1.07
LINC01539-201ENST00000587904 ZNF121P58317 390 aaPredicted RBP8.36□□□□□ -1.07
LINC01539-201ENST00000587904 PCGF3Q3KNV8 242 aa8.36□□□□□ -1.07
LINC01539-201ENST00000587904 ANKRD16Q6P6B7 361 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms