RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 CLN8Q9UBY8 286 aa13.37□□□□□ -0.27
ATG4D-205ENST00000586477 PEX16Q9Y5Y5 336 aa13.37□□□□□ -0.27
ATG4D-205ENST00000586477 F5H0A9 414 aaPredicted RBP13.36□□□□□ -0.27
ATG4D-205ENST00000586477 K7N7A8 449 aa13.36□□□□□ -0.27
ATG4D-205ENST00000586477 SIRPB1O00241 398 aa13.36□□□□□ -0.27
ATG4D-205ENST00000586477 SLC33A1O00400 549 aaPredicted RBP13.36□□□□□ -0.27
ATG4D-205ENST00000586477 MGST3O14880 152 aa13.36□□□□□ -0.27
ATG4D-205ENST00000586477 TPPPO94811 219 aa13.36□□□□□ -0.27
ATG4D-205ENST00000586477 TK1P04183 234 aa13.36□□□□□ -0.27
ATG4D-205ENST00000586477 WNT2P09544 360 aa13.36□□□□□ -0.27
ATG4D-205ENST00000586477 VEGFCP49767 419 aa13.36□□□□□ -0.27
ATG4D-205ENST00000586477 GNB2P62879 340 aa13.36□□□□□ -0.27
ATG4D-205ENST00000586477 MRPS15P82914 257 aaKnown RBP13.36□□□□□ -0.27
ATG4D-205ENST00000586477 Q6P435 159 aa13.36□□□□□ -0.27
ATG4D-205ENST00000586477 C1orf229Q6ZS94 237 aaPredicted RBP13.36□□□□□ -0.27
ATG4D-205ENST00000586477 GDPD3Q7L5L3 318 aa13.36□□□□□ -0.27
ATG4D-205ENST00000586477 TMEM185AQ8NFB2 350 aa13.36□□□□□ -0.27
ATG4D-205ENST00000586477 OR5H6Q8NGV6 325 aa13.36□□□□□ -0.27
ATG4D-205ENST00000586477 OR10R2Q8NGX6 335 aa13.36□□□□□ -0.27
ATG4D-205ENST00000586477 NEK7Q8TDX7 302 aa13.36□□□□□ -0.27
ATG4D-205ENST00000586477 TMEM186Q96B77 213 aa13.36□□□□□ -0.27
ATG4D-205ENST00000586477 RAB3CQ96E17 227 aa13.36□□□□□ -0.27
ATG4D-205ENST00000586477 DPCDQ9BVM2 203 aaPredicted RBP13.36□□□□□ -0.27
ATG4D-205ENST00000586477 KCNK15Q9H427 330 aa13.36□□□□□ -0.27
ATG4D-205ENST00000586477 SLC25A10Q9UBX3 287 aaPredicted RBP13.36□□□□□ -0.27
ATG4D-205ENST00000586477 TRBV23-1A0A0A0MS06 115 aa13.35□□□□□ -0.27
ATG4D-205ENST00000586477 A0A1W2PPH5 198 aa13.35□□□□□ -0.27
ATG4D-205ENST00000586477 POM121CA8CG34 1229 aa13.35□□□□□ -0.27
ATG4D-205ENST00000586477 SERPINE3A8MV23 424 aa13.35□□□□□ -0.27
ATG4D-205ENST00000586477 FAM25AB3EWG3 89 aa13.35□□□□□ -0.27
ATG4D-205ENST00000586477 FAM25CB3EWG5 89 aa13.35□□□□□ -0.27
ATG4D-205ENST00000586477 FAM25GB3EWG6 89 aa13.35□□□□□ -0.27
ATG4D-205ENST00000586477 ZNF737O75373 536 aa13.35□□□□□ -0.27
ATG4D-205ENST00000586477 FOXH1O75593 365 aa13.35□□□□□ -0.27
ATG4D-205ENST00000586477 AVPP01185 164 aa13.35□□□□□ -0.27
ATG4D-205ENST00000586477 PAX5Q02548 391 aa13.35□□□□□ -0.27
ATG4D-205ENST00000586477 GRK1Q15835 563 aa13.35□□□□□ -0.27
ATG4D-205ENST00000586477 BAIAP2L2Q6UXY1 529 aa13.35□□□□□ -0.27
ATG4D-205ENST00000586477 LINC00299Q6ZSB3 139 aa13.35□□□□□ -0.27
ATG4D-205ENST00000586477 Q6ZTK2 550 aa13.35□□□□□ -0.27
ATG4D-205ENST00000586477 GLCCI1Q86VQ1 547 aa13.35□□□□□ -0.27
ATG4D-205ENST00000586477 FAM216BQ8N7L0 139 aa13.35□□□□□ -0.27
ATG4D-205ENST00000586477 SUMF2Q8NBJ7 301 aa13.35□□□□□ -0.27
ATG4D-205ENST00000586477 SLC25A38Q96DW6 304 aa13.35□□□□□ -0.27
ATG4D-205ENST00000586477 DMRTB1Q96MA1 342 aa13.35□□□□□ -0.27
ATG4D-205ENST00000586477 SSBP3Q9BWW4 388 aaPredicted RBP13.35□□□□□ -0.27
ATG4D-205ENST00000586477 RIMS4Q9H426 269 aaPredicted RBP13.35□□□□□ -0.27
ATG4D-205ENST00000586477 PTTG2Q9NZH5 202 aa13.35□□□□□ -0.27
ATG4D-205ENST00000586477 MAB21L2Q9Y586 359 aa13.35□□□□□ -0.27
ATG4D-205ENST00000586477 RAB27BO00194 218 aa13.34□□□□□ -0.27
ATG4D-205ENST00000586477 DVL1O14640 695 aa13.34□□□□□ -0.27
ATG4D-205ENST00000586477 CLPXO76031 633 aa13.34□□□□□ -0.27
ATG4D-205ENST00000586477 GSTP1P09211 210 aaKnown RBP13.34□□□□□ -0.27
ATG4D-205ENST00000586477 NDUFB7P17568 137 aa13.34□□□□□ -0.27
ATG4D-205ENST00000586477 CHATP28329 748 aa13.34□□□□□ -0.27
ATG4D-205ENST00000586477 ERP29P30040 261 aaKnown RBP13.34□□□□□ -0.27
ATG4D-205ENST00000586477 MNDAP41218 407 aa13.34□□□□□ -0.27
ATG4D-205ENST00000586477 CEBPDP49716 269 aaPredicted RBP13.34□□□□□ -0.27
ATG4D-205ENST00000586477 EFNB2P52799 333 aa13.34□□□□□ -0.27
ATG4D-205ENST00000586477 HOXA4Q00056 320 aaPredicted RBP13.34□□□□□ -0.27
ATG4D-205ENST00000586477 CNPY1Q3B7I2 92 aa13.34□□□□□ -0.27
ATG4D-205ENST00000586477 KRTAP24-1Q3LI83 254 aa13.34□□□□□ -0.27
ATG4D-205ENST00000586477 NKAPLQ5M9Q1 402 aa13.34□□□□□ -0.27
ATG4D-205ENST00000586477 TMEM69Q5SWH9 247 aa13.34□□□□□ -0.27
ATG4D-205ENST00000586477 ZNRF1Q8ND25 227 aa13.34□□□□□ -0.27
ATG4D-205ENST00000586477 NICN1Q9BSH3 213 aa13.34□□□□□ -0.27
ATG4D-205ENST00000586477 NCOR1P1Q9H4R4 102 aa13.34□□□□□ -0.27
ATG4D-205ENST00000586477 TRAV24A0A0B4J272 114 aa13.33□□□□□ -0.28
ATG4D-205ENST00000586477 A8MXK9 166 aa13.33□□□□□ -0.28
ATG4D-205ENST00000586477 XRCC3O43542 346 aa13.33□□□□□ -0.28
ATG4D-205ENST00000586477 HPGDSO60760 199 aa13.33□□□□□ -0.28
ATG4D-205ENST00000586477 HIST1H1DP16402 221 aaKnown RBP13.33□□□□□ -0.28
ATG4D-205ENST00000586477 AMY2BP19961 511 aa13.33□□□□□ -0.28
ATG4D-205ENST00000586477 PITPNAQ00169 270 aa13.33□□□□□ -0.28
ATG4D-205ENST00000586477 WDR25Q64LD2 544 aaPredicted RBP13.33□□□□□ -0.28
ATG4D-205ENST00000586477 LYPD2Q6UXB3 125 aa13.33□□□□□ -0.28
ATG4D-205ENST00000586477 C17orf107Q6ZR85 190 aa13.33□□□□□ -0.28
ATG4D-205ENST00000586477 CMTM4Q8IZR5 234 aa13.33□□□□□ -0.28
ATG4D-205ENST00000586477 ST8SIA4Q92187 359 aa13.33□□□□□ -0.28
ATG4D-205ENST00000586477 WDFY2Q96P53 400 aa13.33□□□□□ -0.28
ATG4D-205ENST00000586477 PPA2Q9H2U2 334 aa13.33□□□□□ -0.28
ATG4D-205ENST00000586477 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.33□□□□□ -0.28
ATG4D-205ENST00000586477 CTSZQ9UBR2 303 aa13.33□□□□□ -0.28
ATG4D-205ENST00000586477 TRAV20A0A0B4J274 112 aa13.32□□□□□ -0.28
ATG4D-205ENST00000586477 TMEM82A0PJX8 343 aa13.32□□□□□ -0.28
ATG4D-205ENST00000586477 TMEM30CPA0ZSE6 113 aa13.32□□□□□ -0.28
ATG4D-205ENST00000586477 SOCS1O15524 211 aa13.32□□□□□ -0.28
ATG4D-205ENST00000586477 PSPNO60542 156 aa13.32□□□□□ -0.28
ATG4D-205ENST00000586477 ELK1P19419 428 aa13.32□□□□□ -0.28
ATG4D-205ENST00000586477 ZFP36P26651 326 aaKnown RBP13.32□□□□□ -0.28
ATG4D-205ENST00000586477 OR3A1P47881 315 aa13.32□□□□□ -0.28
ATG4D-205ENST00000586477 MEF2CQ06413 473 aaPredicted RBP13.32□□□□□ -0.28
ATG4D-205ENST00000586477 PNLIPRP3Q17RR3 467 aa13.32□□□□□ -0.28
ATG4D-205ENST00000586477 SLC35E4Q6ICL7 350 aa13.32□□□□□ -0.28
ATG4D-205ENST00000586477 TMPRSS13Q9BYE2 586 aa13.32□□□□□ -0.28
ATG4D-205ENST00000586477 RAB9BQ9NP90 201 aa13.32□□□□□ -0.28
ATG4D-205ENST00000586477 ETAA1Q9NY74 926 aa13.32□□□□□ -0.28
ATG4D-205ENST00000586477 OR6C3Q9NZP0 311 aa13.32□□□□□ -0.28
ATG4D-205ENST00000586477 MGAT4AQ9UM21 535 aa13.32□□□□□ -0.28
ATG4D-205ENST00000586477 A0A0A6YYD4 124 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms