RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 RPSAP08865 295 aaKnown RBP7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 IGLL1P15814 213 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 GABRB1P18505 474 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 RAB3AP20336 220 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 MTNR1BP49286 362 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 GNG10P50151 68 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 GTF2A1P52655 376 aaPredicted RBP7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 ZP1P60852 638 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 MRPL28Q13084 256 aaKnown RBP7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 HES1Q14469 280 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 CDK5R1Q15078 307 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 RSU1Q15404 277 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 C17orf58Q2M2W7 97 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 KPRPQ5T749 579 aaPredicted RBP7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 CCDC144NLQ6NUI1 221 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 Q6ZPA2 131 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 REC114Q7Z4M0 266 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 PARP16Q8N5Y8 322 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 ZNF565Q8N9K5 539 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 OR4X2Q8NGF9 303 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 OR51A2Q8NGJ7 313 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 OR52I1Q8NGK6 324 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 OR13A1Q8NGR1 328 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 WIPF2Q8TF74 440 aaPredicted RBP7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 LEAP2Q969E1 77 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 TOMM40LQ969M1 308 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 RPEQ96AT9 228 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 CREB3L1Q96BA8 519 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 PHF21AQ96BD5 680 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 RBM14Q96PK6 669 aaKnown RBP7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 BARHL1Q9BZE3 327 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 INPP5EQ9NRR6 644 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 NECAP2Q9NVZ3 263 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 TAS2R4Q9NYW5 299 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 CALYQ9NYX4 217 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 KIF25Q9UIL4 384 aa7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 RPL36Q9Y3U8 105 aaKnown RBP7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 AMMECR1Q9Y4X0 333 aaPredicted RBP7.36□□□□□ -1.23
CDK5RAP3-211ENST00000578996 KBTBD11-OT1A0A1B0GTJ5 212 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 GABRPO00591 440 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 HTR3BO95264 441 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 FAM106CPP0CH98 169 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 CD34P28906 385 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 C21orf33P30042 268 aaPredicted RBP7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 CD83Q01151 205 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 RAB40BQ12829 278 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 RIPK1Q13546 671 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 PIGYQ3MUY2 71 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 KLHL22Q53GT1 634 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 UTF1Q5T230 341 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 C10orf99Q6UWK7 81 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 OR51T1Q8NGJ9 327 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 OR56B4Q8NH76 319 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 OR9G1Q8NH87 305 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 RHOXF1Q8NHV9 184 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 RFESDQ8TAC1 157 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 CNIH3Q8TBE1 160 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 MRGPRDQ8TDS7 321 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 MYDGFQ969H8 173 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 KIRREL1Q96J84 757 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 SLC29A1Q99808 456 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 AURKAIP1Q9NWT8 199 aaPredicted RBP7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 IDI2-AS1Q9NZ38 188 aa7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 TSSC4Q9Y5U2 329 aaPredicted RBP7.35□□□□□ -1.23
CDK5RAP3-211ENST00000578996 TRAV39A0A0B4J263 110 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 TRAV24A0A0B4J272 114 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 A0A1W2PPE3 182 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 E9PQ18 207 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 J3QR06 171 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 OR7C1O76099 320 aaPredicted RBP7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 ALX3O95076 343 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 CDRT1O95170 752 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 BAG2O95816 211 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 CLIC3O95833 236 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 CSTBP04080 98 aaKnown RBP7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 CD2P06729 351 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 SNRNP70P08621 437 aaKnown RBP7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 SERPINA2P20848 420 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 SSTR5P35346 364 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 PPP3R1P63098 170 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 SLC35A2P78381 396 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 IL13RA2Q14627 380 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 SMN1Q16637 294 aaKnown RBP7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 TCTEX1D4Q5JR98 221 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 FOXB2Q5VYV0 432 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 C10orf67Q8IYJ2 551 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 ZNF555Q8NEP9 628 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 PXT1Q8NFP0 134 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 OR10X1Q8NGY0 326 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 PLPPR1Q8TBJ4 325 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 GPR148Q8TDV2 347 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 NEK7Q8TDX7 302 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 APH1BQ8WW43 257 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 TMEM106AQ96A25 262 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 S100A13Q99584 98 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 ZNF649Q9BS31 505 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 JAM3Q9BX67 310 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 S100A14Q9HCY8 104 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 FAM118AQ9NWS6 357 aa7.34□□□□□ -1.23
CDK5RAP3-211ENST00000578996 ING4Q9UNL4 249 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms