RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 UTF1Q5T230 341 aa17.75■□□□□ 0.43
CDC42EP4-203ENST00000578516 PRAMEF5Q5TYX0 476 aa17.75■□□□□ 0.43
CDC42EP4-203ENST00000578516 TRAPPC6BQ86SZ2 158 aa17.75■□□□□ 0.43
CDC42EP4-203ENST00000578516 PIP4P2Q8N4L2 257 aa17.75■□□□□ 0.43
CDC42EP4-203ENST00000578516 PPP1R35Q8TAP8 253 aa17.75■□□□□ 0.43
CDC42EP4-203ENST00000578516 FOXRED1Q96CU9 486 aaPredicted RBP17.75■□□□□ 0.43
CDC42EP4-203ENST00000578516 YIPF6Q96EC8 236 aa17.75■□□□□ 0.43
CDC42EP4-203ENST00000578516 ESM1Q9NQ30 184 aa17.75■□□□□ 0.43
CDC42EP4-203ENST00000578516 SSR3Q9UNL2 185 aa17.75■□□□□ 0.43
CDC42EP4-203ENST00000578516 V9GY05 133 aa17.75■□□□□ 0.43
CDC42EP4-203ENST00000578516 TRAV1-2A0A0B4J238 106 aa17.74■□□□□ 0.43
CDC42EP4-203ENST00000578516 ODAMA1E959 279 aa17.74■□□□□ 0.43
CDC42EP4-203ENST00000578516 FAM172BPA6NC97 362 aa17.74■□□□□ 0.43
CDC42EP4-203ENST00000578516 ZNF728P0DKX0 622 aa17.74■□□□□ 0.43
CDC42EP4-203ENST00000578516 PAX6P26367 422 aa17.74■□□□□ 0.43
CDC42EP4-203ENST00000578516 GPR176Q14439 515 aa17.74■□□□□ 0.43
CDC42EP4-203ENST00000578516 DEFB112Q30KQ8 113 aa17.74■□□□□ 0.43
CDC42EP4-203ENST00000578516 RSBN1Q5VWQ0 802 aaPredicted RBP17.74■□□□□ 0.43
CDC42EP4-203ENST00000578516 TEX29Q8N6K0 151 aa17.74■□□□□ 0.43
CDC42EP4-203ENST00000578516 OR51D1Q8NGF3 324 aa17.74■□□□□ 0.43
CDC42EP4-203ENST00000578516 OR13A1Q8NGR1 328 aa17.74■□□□□ 0.43
CDC42EP4-203ENST00000578516 C17orf50Q8WW18 174 aa17.74■□□□□ 0.43
CDC42EP4-203ENST00000578516 ZNF714Q96N38 554 aa17.74■□□□□ 0.43
CDC42EP4-203ENST00000578516 hADV38S2A0JD32 116 aa17.73■□□□□ 0.43
CDC42EP4-203ENST00000578516 C17orf98A8MV24 154 aa17.73■□□□□ 0.43
CDC42EP4-203ENST00000578516 TMEM14DPA8MWL7 114 aa17.73■□□□□ 0.43
CDC42EP4-203ENST00000578516 CSN2P05814 226 aa17.73■□□□□ 0.43
CDC42EP4-203ENST00000578516 JUNBP17275 347 aaPredicted RBP17.73■□□□□ 0.43
CDC42EP4-203ENST00000578516 RAB3BP20337 219 aa17.73■□□□□ 0.43
CDC42EP4-203ENST00000578516 PRTN3P24158 256 aa17.73■□□□□ 0.43
CDC42EP4-203ENST00000578516 FGF9P31371 208 aaPredicted RBP17.73■□□□□ 0.43
CDC42EP4-203ENST00000578516 GLP1RP43220 463 aa17.73■□□□□ 0.43
CDC42EP4-203ENST00000578516 MXD1Q05195 221 aa17.73■□□□□ 0.43
CDC42EP4-203ENST00000578516 MPV17LQ2QL34 196 aa17.73■□□□□ 0.43
CDC42EP4-203ENST00000578516 UBALD1Q8TB05 177 aa17.73■□□□□ 0.43
CDC42EP4-203ENST00000578516 NEK7Q8TDX7 302 aa17.73■□□□□ 0.43
CDC42EP4-203ENST00000578516 TMEM59Q9BXS4 323 aa17.73■□□□□ 0.43
CDC42EP4-203ENST00000578516 METTL8Q9H825 291 aaKnown RBP17.73■□□□□ 0.43
CDC42EP4-203ENST00000578516 RCC2Q9P258 522 aaKnown RBP17.73■□□□□ 0.43
CDC42EP4-203ENST00000578516 LINC00312Q9Y6C7 94 aa17.73■□□□□ 0.43
CDC42EP4-203ENST00000578516 A0A0U1RQK1 487 aa17.72■□□□□ 0.43
CDC42EP4-203ENST00000578516 BPNT1O95861 308 aa17.72■□□□□ 0.43
CDC42EP4-203ENST00000578516 GALP22466 123 aa17.72■□□□□ 0.43
CDC42EP4-203ENST00000578516 OMGP23515 440 aa17.72■□□□□ 0.43
CDC42EP4-203ENST00000578516 ERP29P30040 261 aaKnown RBP17.72■□□□□ 0.43
CDC42EP4-203ENST00000578516 LSM3P62310 102 aaKnown RBP17.72■□□□□ 0.43
CDC42EP4-203ENST00000578516 RPS27AP62979 156 aaKnown RBP17.72■□□□□ 0.43
CDC42EP4-203ENST00000578516 MEF2CQ06413 473 aaPredicted RBP17.72■□□□□ 0.43
CDC42EP4-203ENST00000578516 BLMHQ13867 455 aa17.72■□□□□ 0.43
CDC42EP4-203ENST00000578516 TUSC1Q2TAM9 212 aa17.72■□□□□ 0.43
CDC42EP4-203ENST00000578516 NKAPLQ5M9Q1 402 aa17.72■□□□□ 0.43
CDC42EP4-203ENST00000578516 RAB12Q6IQ22 244 aa17.72■□□□□ 0.43
CDC42EP4-203ENST00000578516 CST11Q9H112 138 aa17.72■□□□□ 0.43
CDC42EP4-203ENST00000578516 IFT22Q9H7X7 185 aa17.72■□□□□ 0.43
CDC42EP4-203ENST00000578516 VCX3AQ9NNX9 186 aa17.72■□□□□ 0.43
CDC42EP4-203ENST00000578516 MEIKINA0A087WXM9 373 aa17.71■□□□□ 0.43
CDC42EP4-203ENST00000578516 UBE2QL1A1L167 161 aa17.71■□□□□ 0.43
CDC42EP4-203ENST00000578516 IFNA2P01563 188 aa17.71■□□□□ 0.43
CDC42EP4-203ENST00000578516 UBBP0CG47 229 aa17.71■□□□□ 0.43
CDC42EP4-203ENST00000578516 SDC2P34741 201 aa17.71■□□□□ 0.43
CDC42EP4-203ENST00000578516 EFNB2P52799 333 aa17.71■□□□□ 0.43
CDC42EP4-203ENST00000578516 C5orf24Q7Z6I8 188 aa17.71■□□□□ 0.43
CDC42EP4-203ENST00000578516 LINC00596Q86U02 117 aa17.71■□□□□ 0.43
CDC42EP4-203ENST00000578516 MRGPRDQ8TDS7 321 aa17.71■□□□□ 0.43
CDC42EP4-203ENST00000578516 CCDC107Q8WV48 283 aa17.71■□□□□ 0.43
CDC42EP4-203ENST00000578516 FAM3DQ96BQ1 224 aa17.71■□□□□ 0.43
CDC42EP4-203ENST00000578516 DMRTB1Q96MA1 342 aa17.71■□□□□ 0.43
CDC42EP4-203ENST00000578516 LPAR5Q9H1C0 372 aa17.71■□□□□ 0.43
CDC42EP4-203ENST00000578516 GHRLQ9UBU3 117 aa17.71■□□□□ 0.43
CDC42EP4-203ENST00000578516 PEX16Q9Y5Y5 336 aa17.71■□□□□ 0.43
CDC42EP4-203ENST00000578516 TMEM272A0A1B0GTI8 110 aa17.7■□□□□ 0.42
CDC42EP4-203ENST00000578516 IFITM5A6NNB3 132 aa17.7■□□□□ 0.42
CDC42EP4-203ENST00000578516 PDCD5O14737 125 aa17.7■□□□□ 0.42
CDC42EP4-203ENST00000578516 NPFFO15130 113 aa17.7■□□□□ 0.42
CDC42EP4-203ENST00000578516 TCF21O43680 179 aa17.7■□□□□ 0.42
CDC42EP4-203ENST00000578516 IGHV1-8P0DP01 117 aa17.7■□□□□ 0.42
CDC42EP4-203ENST00000578516 ARSBP15848 533 aa17.7■□□□□ 0.42
CDC42EP4-203ENST00000578516 FPR2P25090 351 aa17.7■□□□□ 0.42
CDC42EP4-203ENST00000578516 C17orf58Q2M2W7 97 aa17.7■□□□□ 0.42
CDC42EP4-203ENST00000578516 C9orf139Q6ZV77 190 aa17.7■□□□□ 0.42
CDC42EP4-203ENST00000578516 MRPS24Q96EL2 167 aaKnown RBP17.7■□□□□ 0.42
CDC42EP4-203ENST00000578516 SUCNR1Q9BXA5 334 aa17.7■□□□□ 0.42
CDC42EP4-203ENST00000578516 UNKLQ9H9P5 680 aaKnown RBP17.7■□□□□ 0.42
CDC42EP4-203ENST00000578516 PCDHB16Q9NRJ7 776 aa17.7■□□□□ 0.42
CDC42EP4-203ENST00000578516 STEAP1Q9UHE8 339 aa17.7■□□□□ 0.42
CDC42EP4-203ENST00000578516 TRGV10A0A0A0MS01 117 aa17.69■□□□□ 0.42
CDC42EP4-203ENST00000578516 LDLRAD4O15165 306 aa17.69■□□□□ 0.42
CDC42EP4-203ENST00000578516 SOCS1O15524 211 aa17.69■□□□□ 0.42
CDC42EP4-203ENST00000578516 CLPXO76031 633 aa17.69■□□□□ 0.42
CDC42EP4-203ENST00000578516 CHATP28329 748 aa17.69■□□□□ 0.42
CDC42EP4-203ENST00000578516 SSTR5P35346 364 aa17.69■□□□□ 0.42
CDC42EP4-203ENST00000578516 SAA4P35542 130 aa17.69■□□□□ 0.42
CDC42EP4-203ENST00000578516 LTC4SQ16873 150 aa17.69■□□□□ 0.42
CDC42EP4-203ENST00000578516 C2orf76Q3KRA6 126 aa17.69■□□□□ 0.42
CDC42EP4-203ENST00000578516 KRTAP24-1Q3LI83 254 aa17.69■□□□□ 0.42
CDC42EP4-203ENST00000578516 FAM53AQ6NSI3 398 aaPredicted RBP17.69■□□□□ 0.42
CDC42EP4-203ENST00000578516 C1orf122Q6ZSJ8 110 aa17.69■□□□□ 0.42
CDC42EP4-203ENST00000578516 ZDHHC22Q8N966 263 aa17.69■□□□□ 0.42
CDC42EP4-203ENST00000578516 ZNF418Q8TF45 676 aaPredicted RBP17.69■□□□□ 0.42
CDC42EP4-203ENST00000578516 SULT4A1Q9BR01 284 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms