RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 ING3Q9NXR8 418 aa11.54□□□□□ -0.56
RPAIN-217ENST00000575711 ABRACLQ9P1F3 81 aa11.54□□□□□ -0.56
RPAIN-217ENST00000575711 ONECUT1Q9UBC0 465 aa11.54□□□□□ -0.56
RPAIN-217ENST00000575711 AUP1Q9Y679 476 aa11.54□□□□□ -0.56
RPAIN-217ENST00000575711 ABCA2Q9BZC7 2435 aa11.54□□□□□ -0.56
RPAIN-217ENST00000575711 METTL21EPA6NDL7 271 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 CCDC160A6NGH7 325 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 PAHP00439 452 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 GLAP06280 429 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 HNF1AP20823 631 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 BLVRBP30043 206 aaPredicted RBP11.53□□□□□ -0.56
RPAIN-217ENST00000575711 VEGFCP49767 419 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 RORCP51449 518 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 ARF6P62330 175 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 PLA2G7Q13093 441 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 METTL11BQ5VVY1 283 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 TMEM200BQ69YZ2 307 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 SIGIRRQ6IA17 410 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 BRICD5Q6PL45 260 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 FAM89BQ8N5H3 189 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 TEX29Q8N6K0 151 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 KIR3DL3Q8N743 410 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 TPRX1Q8N7U7 411 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 OR56B1Q8NGI3 324 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 ISOC1Q96CN7 298 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 COQ2Q96H96 371 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 ETV7Q9Y603 341 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 KPTNQ9Y664 436 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 CEPT1Q9Y6K0 416 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 MED13LQ71F56 2210 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 ABCA1O95477 2261 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 F8P00451 2351 aa11.53□□□□□ -0.56
RPAIN-217ENST00000575711 ACANP16112 2415 aa11.52□□□□□ -0.56
RPAIN-217ENST00000575711 A0A0A6YYD4 124 aa11.52□□□□□ -0.57
RPAIN-217ENST00000575711 M0R1W7 72 aa11.52□□□□□ -0.57
RPAIN-217ENST00000575711 SOCS1O15524 211 aa11.52□□□□□ -0.57
RPAIN-217ENST00000575711 CHATP28329 748 aa11.52□□□□□ -0.57
RPAIN-217ENST00000575711 GLIPR1P48060 266 aa11.52□□□□□ -0.57
RPAIN-217ENST00000575711 EFNB2P52799 333 aa11.52□□□□□ -0.57
RPAIN-217ENST00000575711 PAX5Q02548 391 aa11.52□□□□□ -0.57
RPAIN-217ENST00000575711 BLMHQ13867 455 aa11.52□□□□□ -0.57
RPAIN-217ENST00000575711 FAM120AOSQ5T036 256 aa11.52□□□□□ -0.57
RPAIN-217ENST00000575711 RSBN1Q5VWQ0 802 aaPredicted RBP11.52□□□□□ -0.57
RPAIN-217ENST00000575711 TRAPPC6BQ86SZ2 158 aa11.52□□□□□ -0.57
RPAIN-217ENST00000575711 PLPPR1Q8TBJ4 325 aa11.52□□□□□ -0.57
RPAIN-217ENST00000575711 KCTD12Q96CX2 325 aaKnown RBP11.52□□□□□ -0.57
RPAIN-217ENST00000575711 WDFY2Q96P53 400 aa11.52□□□□□ -0.57
RPAIN-217ENST00000575711 ATG5Q9H1Y0 275 aa11.52□□□□□ -0.57
RPAIN-217ENST00000575711 PLEKHJ1Q9NW61 149 aa11.52□□□□□ -0.57
RPAIN-217ENST00000575711 ETAA1Q9NY74 926 aa11.52□□□□□ -0.57
RPAIN-217ENST00000575711 SPATA2Q9UM82 520 aa11.52□□□□□ -0.57
RPAIN-217ENST00000575711 LINC00312Q9Y6C7 94 aa11.52□□□□□ -0.57
RPAIN-217ENST00000575711 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.51□□□□□ -0.573e-7■■■■□ 21.5
RPAIN-217ENST00000575711 MEIKINA0A087WXM9 373 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 TRGV10A0A0A0MS01 117 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 hCG_1809904A0A1W2PP81 198 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 A0A1W2PPE2 198 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 A0A1W2PR64 198 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 A0A1W2PRV1 198 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 TMEM30CPA0ZSE6 113 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 ODAMA1E959 279 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 UBE2QL1A1L167 161 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 INAFM1C9JVW0 142 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 H3BMQ9 156 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 TOX4O94842 621 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 SOX6P35712 828 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 ZNF273Q14593 569 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 SPCS2Q15005 226 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 SLC35E4Q6ICL7 350 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 Q6ZTK2 550 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 C6orf201Q7Z4U5 140 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 OR5H6Q8NGV6 325 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 ZNF714Q96N38 554 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 PCGF1Q9BSM1 259 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 NCOR1P1Q9H4R4 102 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 RHBDL2Q9NX52 303 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 OR6C3Q9NZP0 311 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 OPN4Q9UHM6 478 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 KIF25Q9UIL4 384 aa11.51□□□□□ -0.57
RPAIN-217ENST00000575711 UBE2J1Q9Y385 318 aaPredicted RBP11.51□□□□□ -0.57
RPAIN-217ENST00000575711 MEX3AA1L020 520 aaKnown RBP11.5□□□□□ -0.57
RPAIN-217ENST00000575711 FOXI3A8MTJ6 420 aaPredicted RBP11.5□□□□□ -0.57
RPAIN-217ENST00000575711 CA11O75493 328 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 SCGNO76038 276 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 AVPP01185 164 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 ZNF728P0DKX0 622 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 CCL3L1P16619 93 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 ZNF182P17025 639 aaPredicted RBP11.5□□□□□ -0.57
RPAIN-217ENST00000575711 GLP1RP43220 463 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 ZNF497Q6ZNH5 498 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 C1orf122Q6ZSJ8 110 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 TCF23Q7RTU1 214 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 ZNF565Q8N9K5 539 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 OR10R2Q8NGX6 335 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 NANPQ8TBE9 248 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 ACOT12Q8WYK0 555 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 AP3S1Q92572 193 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 CORO2AQ92828 525 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 PHF21AQ96BD5 680 aa11.5□□□□□ -0.57
RPAIN-217ENST00000575711 UPRTQ96BW1 309 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms