RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 CLN6Q9NWW5 311 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 TVP23BQ9NYZ1 205 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 H2AFY2Q9P0M6 372 aaPredicted RBP7.04□□□□□ -1.28
SMG6-218ENST00000575454 TAGLN3Q9UI15 199 aa7.04□□□□□ -1.28
SMG6-218ENST00000575454 MRM2Q9UI43 246 aaKnown RBP7.04□□□□□ -1.28
SMG6-218ENST00000575454 LINC01548A6NM66 108 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 DEGS1O15121 323 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 LDLRAD4O15165 306 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 SULT1C4O75897 302 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 RPP14O95059 124 aaKnown RBP7.03□□□□□ -1.28
SMG6-218ENST00000575454 UBCP0CG48 685 aaKnown RBP7.03□□□□□ -1.28
SMG6-218ENST00000575454 VEGFCP49767 419 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 RUNX1Q01196 453 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 SCN1BQ07699 218 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 ODF4Q2M2E3 257 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 C17orf58Q2M2W7 97 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 TMEM65Q6PI78 240 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 PLEKHG7Q6ZR37 379 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 UTS2BQ765I0 119 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 OVCH2Q7RTZ1 564 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 CATSPERDQ86XM0 798 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 IZUMO1Q8IYV9 350 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 YIPF7Q8N8F6 280 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 DNAJC9Q8WXX5 260 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 UBE2E2Q96LR5 201 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 ELAC2Q9BQ52 826 aaKnown RBP7.03□□□□□ -1.28
SMG6-218ENST00000575454 GHITMQ9H3K2 345 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 CALYQ9NYX4 217 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 IDI2-AS1Q9NZ38 188 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 ZNF580Q9UK33 172 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 PSG11Q9UQ72 335 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 VSIG4Q9Y279 399 aa7.03□□□□□ -1.28
SMG6-218ENST00000575454 MEIKINA0A087WXM9 373 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 METTL15A6NJ78 407 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 HSD17B6O14756 317 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 MAGEB4O15481 346 aaPredicted RBP7.02□□□□□ -1.29
SMG6-218ENST00000575454 SAP30O75446 220 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 SASH3O75995 380 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 KDM4BO94953 1096 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 MOSP00540 346 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 IL1AP01583 271 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 IGF1P05019 195 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 CGB3P0DN86 165 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 CGB7P0DN87 165 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 CALCBP10092 127 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 ZNF20P17024 532 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 ATF1P18846 271 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 PSMB8P28062 276 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 SOX6P35712 828 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 GLP1RP43220 463 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 CFHR3Q02985 330 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 ZNF616Q08AN1 781 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 ZNF816Q0VGE8 651 aaPredicted RBP7.02□□□□□ -1.29
SMG6-218ENST00000575454 TRIM25Q14258 630 aaKnown RBP7.02□□□□□ -1.29
SMG6-218ENST00000575454 HSP90B2PQ58FF3 399 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 TMEM236Q5W0B7 351 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 MOB3BQ86TA1 216 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 SAXO1Q8IYX7 474 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 FAM71E2Q8N5Q1 922 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 OR51T1Q8NGJ9 327 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 OR6Q1Q8NGQ2 317 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 COQ2Q96H96 371 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 EAF1Q96JC9 268 aaPredicted RBP7.02□□□□□ -1.29
SMG6-218ENST00000575454 LRGUKQ96M69 825 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 TM2D3Q9BRN9 247 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 ADGRL4Q9HBW9 690 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 ING3Q9NXR8 418 aa7.02□□□□□ -1.29
SMG6-218ENST00000575454 IGHV1-3A0A0C4DH29 117 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 NPIPB11E5RHQ5 1161 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 SLC33A1O00400 549 aaPredicted RBP7.01□□□□□ -1.29
SMG6-218ENST00000575454 OVOL1O14753 267 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 FAM107AO95990 144 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 MT-ND2P03891 347 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 HCKP08631 526 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 OR2T7P0C7T2 308 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 GP9P14770 177 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 IL3RAP26951 378 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 CD1BP29016 333 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 KIR3DL2P43630 455 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 KCNJ3P48549 501 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 CRISP1P54107 249 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 ISL1P61371 349 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 ATXN7L3Q14CW9 347 aaPredicted RBP7.01□□□□□ -1.29
SMG6-218ENST00000575454 TMEM244Q5VVB8 128 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 NXNL2Q5VZ03 156 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 Q6P435 159 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 GID4Q8IVV7 300 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 Q8N6K4 173 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 IL17DQ8TAD2 202 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 LEAP2Q969E1 77 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 KCTD7Q96MP8 289 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 OPALINQ96PE5 141 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 S1PR3Q99500 378 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 OSBPL10Q9BXB5 764 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 EDA2RQ9HAV5 297 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 ISYNA1Q9NPH2 558 aa7.01□□□□□ -1.29
SMG6-218ENST00000575454 FRAS1Q86XX4 4008 aa7□□□□□ -1.29
SMG6-218ENST00000575454 IGKV1-9A0A0C4DH69 117 aa7□□□□□ -1.29
SMG6-218ENST00000575454 LOC107986453A0A1B0GWG9 222 aa7□□□□□ -1.29
SMG6-218ENST00000575454 H3BSH0 61 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms