RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 CLDN23Q96B33 292 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 ELSPBP1Q96BH3 223 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 TAMM41Q96BW9 452 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 OPTNQ96CV9 577 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 ZNF414Q96IQ9 312 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 PACRGQ96M98 296 aaPredicted RBP1.42□□□□□ -2.18
CHD3-217ENST00000574022 OLFM3Q96PB7 478 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 RNF157Q96PX1 679 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 DERL3Q96Q80 235 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 PYGO2Q9BRQ0 406 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 ZNF649Q9BS31 505 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 C9orf16Q9BUW7 83 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 MROQ9BYG7 248 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 BCL2L14Q9BZR8 327 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 ZNF436Q9C0F3 470 aaPredicted RBP1.42□□□□□ -2.18
CHD3-217ENST00000574022 SLC2A9Q9NRM0 540 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 CA10Q9NS85 328 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 ZNRD1Q9P1U0 126 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 ENOPH1Q9UHY7 261 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 ZNF222Q9UK12 451 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 C14orf166Q9Y224 244 aaKnown RBP1.42□□□□□ -2.18
CHD3-217ENST00000574022 ZNF706Q9Y5V0 76 aaPredicted RBP1.42□□□□□ -2.18
CHD3-217ENST00000574022 A0A1W2PP64 1363 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 TET2Q6N021 2002 aaPredicted RBP1.42□□□□□ -2.18
CHD3-217ENST00000574022 SCN2AQ99250 2005 aa1.42□□□□□ -2.18
CHD3-217ENST00000574022 CLUHO75153 1309 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 TTC21AQ8NDW8 1320 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 TSPOAP1O95153 1857 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 MIA3Q5JRA6 1907 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 IGHV3-49A0A0A0MS15 119 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 IGKV1-6A0A0C4DH72 117 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 A8MWL6 223 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 KLLNB2CW77 178 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 C9JQL5 133 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 TMX2-CTNND1H3BSU7 103 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 RGS5O15539 181 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 TCF21O43680 179 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 ARL6IP5O75915 188 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 IGKV1-39P01597 117 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 IGKV3-15P01624 115 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 IGLV3-25P01717 112 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 IGKV1D-39P04432 117 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 IL6P05231 212 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 SEC11BP0C7V7 166 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 GABRA1P14867 456 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 GADD45AP24522 165 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 ELK4P28324 431 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 MIPP30301 263 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 HSPA13P48723 471 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 SULT1A2P50226 295 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 GDI2P50395 445 aaKnown RBP1.41□□□□□ -2.18
CHD3-217ENST00000574022 IDH3GP51553 393 aaPredicted RBP1.41□□□□□ -2.18
CHD3-217ENST00000574022 TCL1AP56279 114 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 DSCR10P59022 87 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 TAS2R43P59537 309 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 ERVS71-1P61550 626 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 VBP1P61758 197 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 SLC35A2P78381 396 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 NDPQ00604 133 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 GLO1Q04760 184 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 FMODQ06828 376 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 SYCNQ0VAF6 134 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 SRSF6Q13247 344 aaKnown RBP1.41□□□□□ -2.18
CHD3-217ENST00000574022 PDK2Q15119 407 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 ZNF79Q15937 498 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 SPIN3Q5JUX0 258 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 CLVS2Q5SYC1 327 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 FAM222AQ5U5X8 452 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 CYB5R2Q6BCY4 276 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 SHISA6Q6ZSJ9 500 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 MYPOPQ86VE0 399 aaPredicted RBP1.41□□□□□ -2.18
CHD3-217ENST00000574022 NATD1Q8N6N6 113 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 LINC00612Q8N6U2 182 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 ZDHHC22Q8N966 263 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 ZIC4Q8N9L1 334 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 GPR32P1Q8NGA4 272 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 OR5B17Q8NGF7 314 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 OR5H2Q8NGV7 314 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 MFSD8Q8NHS3 518 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 C16orf78Q8WTQ4 265 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 EEF1AKMT1Q8WVE0 214 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 TMBIM1Q969X1 311 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 NARS2Q96I59 477 aaKnown RBP1.41□□□□□ -2.18
CHD3-217ENST00000574022 DOK1Q99704 481 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 TBL1YQ9BQ87 522 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 PRSS27Q9BQR3 290 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 VCX3BQ9H321 246 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 VSIRQ9H7M9 311 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 LHX9Q9NQ69 397 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 XPNPEP1Q9NQW7 623 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 PARVAQ9NVD7 372 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 TAS2R5Q9NYW4 299 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 TAC3Q9UHF0 121 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 GLS2Q9UI32 602 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 ATPIF1Q9UII2 106 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 NEU3Q9UQ49 428 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 BTRCQ9Y297 605 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 POLR1DQ9Y2S0 133 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 TMEM14AQ9Y6G1 99 aa1.41□□□□□ -2.18
CHD3-217ENST00000574022 ADGRL3Q9HAR2 1447 aa1.4□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms