RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 RAB3BP20337 219 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 PRTN3P24158 256 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 TGFBR1P36897 503 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 P2RX3P56373 397 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 LSM3P62310 102 aaKnown RBP9.06□□□□□ -0.96
CHD3-216ENST00000573936 RAB11BQ15907 218 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 CTF1Q16619 201 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 KLF17Q5JT82 389 aaPredicted RBP9.06□□□□□ -0.96
CHD3-216ENST00000573936 KRBOX4Q5JUW0 171 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 ATAD3CQ5T2N8 411 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 GDPGP1Q6ZNW5 385 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 C9orf139Q6ZV77 190 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 TPRA1Q86W33 373 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 BPIFB2Q8N4F0 458 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 Q8N7P7 452 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 ZNF418Q8TF45 676 aaPredicted RBP9.06□□□□□ -0.96
CHD3-216ENST00000573936 CORO2AQ92828 525 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 LHX4Q969G2 390 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 C1orf147Q96MC9 270 aaPredicted RBP9.06□□□□□ -0.96
CHD3-216ENST00000573936 SUCNR1Q9BXA5 334 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 PPA2Q9H2U2 334 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 NCOR1P1Q9H4R4 102 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 OCEL1Q9H607 264 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 HEXA-AS1Q9H8Q6 139 aa9.06□□□□□ -0.96
CHD3-216ENST00000573936 UBE2J1Q9Y385 318 aaPredicted RBP9.06□□□□□ -0.96
CHD3-216ENST00000573936 TRGV10A0A0A0MS01 117 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 TRAV24A0A0B4J272 114 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 CENPVL3A0A0U1RRI6 287 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 A0A1W2PP11 408 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 SHISA3A0PJX4 238 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 C17orf98A8MV24 154 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 MCRIP1C9JLW8 97 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 TCF21O43680 179 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 MPIG6BO95866 241 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 ZNF728P0DKX0 622 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 VSIG8P0DPA2 414 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 ARSBP15848 533 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 TMBIM6P55061 237 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 ERVFRD-1P60508 538 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 NCS1P62166 190 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 PAX5Q02548 391 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 RBM39Q14498 530 aaKnown RBP9.05□□□□□ -0.96
CHD3-216ENST00000573936 ZNF273Q14593 569 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 TAF9Q16594 264 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 FOXB2Q5VYV0 432 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 C12orf54Q6X4T0 127 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 USP43Q70EL4 1123 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 OR2W3Q7Z3T1 314 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 TRAPPC6BQ86SZ2 158 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 SUMF2Q8NBJ7 301 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 Q96M66 194 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 KCTD7Q96MP8 289 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 ZNF714Q96N38 554 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 JMJD8Q96S16 334 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 GFI1Q99684 422 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 URM1Q9BTM9 101 aaKnown RBP9.05□□□□□ -0.96
CHD3-216ENST00000573936 DPCDQ9BVM2 203 aaPredicted RBP9.05□□□□□ -0.96
CHD3-216ENST00000573936 TMEM59Q9BXS4 323 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 SELENOIQ9C0D9 397 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 BANF2Q9H503 90 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 TAS2R3Q9NYW6 316 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 OR6C3Q9NZP0 311 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 ZNF69Q9UC07 566 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 STEAP1Q9UHE8 339 aa9.05□□□□□ -0.96
CHD3-216ENST00000573936 IGHV1-69DA0A0B4J2H0 117 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 SMIM31A0A1B0GVY4 71 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 ODAMA1E959 279 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 A6NHS1 94 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 TMEM14DPA8MWL7 114 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 IGHV1-69P01742 117 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 IGHV4-38-2P0DP08 117 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 FUT3P21217 361 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 CFPP27918 469 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 GLIPR1P48060 266 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 UBE2E1P51965 193 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 VBP1P61758 197 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 AESQ08117 197 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 ATXN7L3Q14CW9 347 aaPredicted RBP9.04□□□□□ -0.96
CHD3-216ENST00000573936 FAM189A2Q15884 450 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 SLC35E4Q6ICL7 350 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 RBMS3Q6XE24 437 aaKnown RBP9.04□□□□□ -0.96
CHD3-216ENST00000573936 TPRX1Q8N7U7 411 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 ZNF565Q8N9K5 539 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 TMEM104Q8NE00 496 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 RAB2BQ8WUD1 216 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 SLC25A28Q96A46 364 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 ISOC1Q96CN7 298 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 NEDD4LQ96PU5 975 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 BCL7BQ9BQE9 202 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 GAL3ST2Q9H3Q3 398 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 SIRT7Q9NRC8 400 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 ARHGAP32A7KAX9 2087 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 DOCK11Q5JSL3 2073 aa9.04□□□□□ -0.96
CHD3-216ENST00000573936 IGHV3OR16-10A0A075B7F0 116 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 CCDC160A6NGH7 325 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 ZNF729A6NN14 1252 aaPredicted RBP9.03□□□□□ -0.96
CHD3-216ENST00000573936 IFITM5A6NNB3 132 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 NOTOA8MTQ0 251 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 H3BMQ9 156 aa9.03□□□□□ -0.96
CHD3-216ENST00000573936 HSPB6O14558 160 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms