RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 RPL22L1Q6P5R6 122 aaKnown RBP6.03□□□□□ -1.44
NUP88-205ENST00000572809 TMPRSS11AQ6ZMR5 421 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 ZNF782Q6ZMW2 699 aaPredicted RBP6.03□□□□□ -1.44
NUP88-205ENST00000572809 Q6ZSV7 163 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 SAXO1Q8IYX7 474 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 PARP16Q8N5Y8 322 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 PACRGLQ8N7B6 248 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 TPRX1Q8N7U7 411 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 OR4S1Q8NGB4 309 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 OR5D18Q8NGL1 313 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 OR13D1Q8NGV5 346 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 CNIH3Q8TBE1 160 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 TSEN15Q8WW01 171 aaKnown RBP6.03□□□□□ -1.44
NUP88-205ENST00000572809 C17orf50Q8WW18 174 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 CYGBQ8WWM9 190 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 MALSU1Q96EH3 234 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 TMEM80Q96HE8 168 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 AJUBAQ96IF1 538 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 CHST6Q9GZX3 395 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 PPA2Q9H2U2 334 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 C16orf95Q9H693 158 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 EXOSC4Q9NPD3 245 aaKnown RBP6.03□□□□□ -1.44
NUP88-205ENST00000572809 CHCHD3Q9NX63 227 aaKnown RBP6.03□□□□□ -1.44
NUP88-205ENST00000572809 BABAM2Q9NXR7 383 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 PCDHGB5Q9Y5G0 923 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 LINC00312Q9Y6C7 94 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 ANK2Q01484 3957 aa6.03□□□□□ -1.44
NUP88-205ENST00000572809 A0A0G2JK05 382 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 FUOMA2VDF0 154 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 FAM90A8PA6NJQ4 464 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 SIRPB1O00241 398 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 DEGS1O15121 323 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 OGG1O15527 345 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 CLPXO76031 633 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 OR2H2O95918 312 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 RBP4P02753 201 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 ARG1P05089 322 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 CD2P06729 351 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 RAB3AP20336 220 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 PAX6P26367 422 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 OR3A1P47881 315 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 SOX2P48431 317 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 BMXP51813 675 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 KRTAP10-3P60369 221 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 ADARB1P78563 741 aaKnown RBP6.02□□□□□ -1.45
NUP88-205ENST00000572809 AESQ08117 197 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 IL18R1Q13478 541 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 MED21Q13503 144 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 RCN1Q15293 331 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 LY6EQ16553 131 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 LRRC75BQ2VPJ9 315 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 OR2G6Q5TZ20 316 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 DHRS7BQ6IAN0 325 aaPredicted RBP6.02□□□□□ -1.45
NUP88-205ENST00000572809 CRIP3Q6Q6R5 217 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 OVCH2Q7RTZ1 564 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 LHFPL4Q7Z7J7 247 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 TRAPPC6BQ86SZ2 158 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 SATL1Q86VE3 508 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 SETD9Q8NE22 299 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 OR11H6Q8NGC7 330 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 GPR148Q8TDV2 347 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 GGHQ92820 318 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 ZNF714Q96N38 554 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 GPER1Q99527 375 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 CITED1Q99966 193 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 DIMT1Q9UNQ2 313 aaKnown RBP6.02□□□□□ -1.45
NUP88-205ENST00000572809 EXOSC1Q9Y3B2 195 aaKnown RBP6.02□□□□□ -1.45
NUP88-205ENST00000572809 TBL2Q9Y4P3 447 aaKnown RBP6.02□□□□□ -1.45
NUP88-205ENST00000572809 HSPE1-MOB4S4R3N1 261 aa6.02□□□□□ -1.45
NUP88-205ENST00000572809 ALDOBP05062 364 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 ZNF44P15621 663 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 MYL12AP19105 171 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 KIR2DS4P43632 304 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 GLIPR1P48060 266 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 RAB13P51153 203 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 P2RX3P56373 397 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 PROK1P58294 105 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 ZP1P60852 638 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 ST3GAL4Q11206 333 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 DYNC1I2Q13409 638 aaKnown RBP6.01□□□□□ -1.45
NUP88-205ENST00000572809 CDK5R1Q15078 307 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 FAM189A2Q15884 450 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 SSX2Q16385 188 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 ZNF626Q68DY1 528 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 XAF1Q6GPH4 301 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 OR52W1Q6IF63 320 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 ZNF529Q6P280 563 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 Q6P435 159 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 TCF23Q7RTU1 214 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 CHST4Q8NCG5 386 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 PXT1Q8NFP0 134 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 OR51A2Q8NGJ7 313 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 PIFOQ8TCI5 191 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 CORO2AQ92828 525 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 TMEM106AQ96A25 262 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 CPNE2Q96FN4 548 aaPredicted RBP6.01□□□□□ -1.45
NUP88-205ENST00000572809 NR1H4Q96RI1 486 aaPredicted RBP6.01□□□□□ -1.45
NUP88-205ENST00000572809 TMEM133Q9H2Q1 129 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 RAB18Q9NP72 206 aa6.01□□□□□ -1.45
NUP88-205ENST00000572809 ABCB10Q9NRK6 738 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms