RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 FAM220BPB1ANY3 271 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 H7C417 338 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 SLC22A1O15245 554 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 NDUFS5O43920 106 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 MMP23AO75900 390 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 TNFSF15O95150 251 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 C1QBP02746 253 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 ATP5G1P05496 136 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 TSPAN19P0C672 248 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 SPI1P17947 270 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 RAB3BP20337 219 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 CERS1P27544 350 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 SPRP35270 261 aaPredicted RBP3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 GLRXP35754 106 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 SELENOPP49908 381 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 KLF3P57682 345 aaPredicted RBP3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 RPS23P62266 143 aaKnown RBP3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 SELENOTP62341 195 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 PRR3P79522 188 aaKnown RBP3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 EMX2Q04743 252 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 INCA1Q0VD86 236 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 GRK1Q15835 563 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 ZNF718Q3SXZ3 478 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 C10orf25Q5T742 122 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 TSPO2Q5TGU0 170 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 SPATA31B1PQ5VZV4 182 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 PTAR1Q7Z6K3 402 aaPredicted RBP3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 C17orf82Q86X59 251 aaPredicted RBP3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 SECTM1Q8WVN6 248 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 FAM3DQ96BQ1 224 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 RNF157Q96PX1 679 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 RBM38Q9H0Z9 239 aaKnown RBP3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 OCIAD1Q9NX40 245 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 CALML5Q9NZT1 146 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 MTFP1Q9UDX5 166 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 SSR3Q9UNL2 185 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 TONSLQ96HA7 1378 aa3.97□□□□□ -1.77
TOPBP1-210ENST00000572787 FAM135BQ49AJ0 1406 aa3.96□□□□□ -1.77
TOPBP1-210ENST00000572787 VPS8Q8N3P4 1428 aa3.96□□□□□ -1.77
TOPBP1-210ENST00000572787 KIF1BO60333 1816 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 TRGV8A0A0C4DH27 118 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 IGHV3-38A0A0C4DH36 116 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 MYBPHLA2RUH7 354 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 C5orf49A4QMS7 147 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 TRAPPC13A5PLN9 417 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 OR5H14A6NHG9 310 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 OTOL1A6NHN0 477 aaPredicted RBP3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 G3V2L1 256 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 K7EPK0 472 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 K7ERU9 68 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 SUPT7LO94864 414 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 HBZP02008 142 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 DBIP07108 87 aaKnown RBP3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 VDAC1P21796 283 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 PRTN3P24158 256 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 VEGFCP49767 419 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 DAD1P61803 113 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 RPS28P62857 69 aaKnown RBP3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 SRPXP78539 464 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 HPCAP84074 193 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 BAMBIQ13145 260 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 PRDX4Q13162 271 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 ICAM4Q14773 271 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 PAFAH1B3Q15102 231 aaKnown RBP3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 GSG1Q2KHT4 349 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 TNFAIP8L3Q5GJ75 292 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 FAM201AQ5SY85 155 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 AGTRAPQ6RW13 159 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 IGFL2Q6UWQ7 119 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 GSG1LQ6UXU4 331 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 ZNF620Q6ZNG0 422 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 TEX43Q6ZNM6 134 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 C20orf196Q8IYI0 205 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 SLC22A18ASQ8N1D0 253 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 ZNF283Q8N7M2 679 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 OR4M1Q8NGD0 313 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 OR10AD1Q8NGE0 317 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 OR1N2Q8NGR9 330 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 OR13C4Q8NGS5 318 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 FLVCR1-AS1Q8TAF5 88 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 ZNF675Q8TD23 568 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 CANT1Q8WVQ1 401 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 ZNF501Q96CX3 271 aaPredicted RBP3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 C14orf105Q9NVL8 296 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 ZNF226Q9NYT6 803 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 ZNF629Q9UEG4 869 aaPredicted RBP3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 HDGFL3Q9Y3E1 203 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 RBM7Q9Y580 266 aaKnown RBP3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 GRIN2BQ13224 1484 aa3.96□□□□□ -1.78
TOPBP1-210ENST00000572787 IGSF9BQ9UPX0 1349 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 WRNQ14191 1432 aaPredicted RBP eCLIP3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 ZNF608Q9ULD9 1512 aaPredicted RBP3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 WDR97A6NE52 1622 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 ZCCHC11Q5TAX3 1644 aaKnown RBP3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 RB1CC1Q8TDY2 1594 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 PGPA6NDG6 321 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 KRTAP9-7A8MTY7 169 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 C8orf87E5RJ46 101 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 H7C1C5 153 aa3.95□□□□□ -1.78
TOPBP1-210ENST00000572787 SPAG7O75391 227 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms