RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 RAB4AP20338 218 aa13.34□□□□□ -0.27
SMG6-207ENST00000570756 CASP6P55212 293 aa13.34□□□□□ -0.27
SMG6-207ENST00000570756 RELQ04864 619 aaPredicted RBP13.34□□□□□ -0.27
SMG6-207ENST00000570756 CNN3Q15417 329 aaKnown RBP13.34□□□□□ -0.27
SMG6-207ENST00000570756 SLC25A53Q5H9E4 307 aa13.34□□□□□ -0.27
SMG6-207ENST00000570756 ABLIM2Q6H8Q1 611 aa13.34□□□□□ -0.27
SMG6-207ENST00000570756 TGIF2LYQ8IUE0 185 aa13.34□□□□□ -0.27
SMG6-207ENST00000570756 FAM221AA4D161 298 aa13.33□□□□□ -0.27
SMG6-207ENST00000570756 CLEC18AA5D8T8 446 aa13.33□□□□□ -0.27
SMG6-207ENST00000570756 SPRY1O43609 319 aaPredicted RBP13.33□□□□□ -0.27
SMG6-207ENST00000570756 IGHV4-34P06331 123 aa13.33□□□□□ -0.27
SMG6-207ENST00000570756 MSX1P28360 303 aa13.33□□□□□ -0.27
SMG6-207ENST00000570756 COL10A1Q03692 680 aa13.33□□□□□ -0.27
SMG6-207ENST00000570756 ZFP36L1Q07352 338 aaKnown RBP13.33□□□□□ -0.27
SMG6-207ENST00000570756 ZNF154Q13106 437 aa13.33□□□□□ -0.27
SMG6-207ENST00000570756 EXT1Q16394 746 aa13.33□□□□□ -0.27
SMG6-207ENST00000570756 MPV17LQ2QL34 196 aa13.33□□□□□ -0.27
SMG6-207ENST00000570756 CLEC18CQ8NCF0 446 aa13.33□□□□□ -0.27
SMG6-207ENST00000570756 DYRK2Q92630 601 aa13.33□□□□□ -0.27
SMG6-207ENST00000570756 KLRF1Q9NZS2 232 aa13.33□□□□□ -0.27
SMG6-207ENST00000570756 RNF150Q9ULK6 438 aa13.33□□□□□ -0.27
SMG6-207ENST00000570756 GAB2Q9UQC2 676 aa13.33□□□□□ -0.27
SMG6-207ENST00000570756 M0R135 149 aa13.33□□□□□ -0.28
SMG6-207ENST00000570756 HOXA6P31267 233 aa13.33□□□□□ -0.28
SMG6-207ENST00000570756 ID3Q02535 119 aa13.33□□□□□ -0.28
SMG6-207ENST00000570756 PLPPR5Q32ZL2 321 aa13.33□□□□□ -0.28
SMG6-207ENST00000570756 C16orf47Q6ZP98 133 aaPredicted RBP13.33□□□□□ -0.28
SMG6-207ENST00000570756 LANCL3Q6ZV70 420 aa13.33□□□□□ -0.28
SMG6-207ENST00000570756 TBC1D26Q86UD7 250 aa13.33□□□□□ -0.28
SMG6-207ENST00000570756 WDR5BQ86VZ2 330 aa13.33□□□□□ -0.28
SMG6-207ENST00000570756 THNSL2Q86YJ6 484 aa13.33□□□□□ -0.28
SMG6-207ENST00000570756 SELENOHQ8IZQ5 122 aaKnown RBP13.33□□□□□ -0.28
SMG6-207ENST00000570756 OR2V1Q8NHB1 315 aa13.33□□□□□ -0.28
SMG6-207ENST00000570756 ZNF799Q96GE5 643 aa13.33□□□□□ -0.28
SMG6-207ENST00000570756 PLSCR2Q9NRY7 297 aa13.33□□□□□ -0.28
SMG6-207ENST00000570756 SHISA7A6NL88 538 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 EREGO14944 169 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 IFNA1P01562 189 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 VDAC1P21796 283 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 IQCJQ1A5X6 159 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 ODF3L1Q8IXM7 274 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 C20orf196Q8IYI0 205 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 SPTSSAQ969W0 71 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 ADGRG7Q96K78 797 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 HIST1H2AAQ96QV6 131 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 PRDM6Q9NQX0 595 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 ZNF581Q9P0T4 197 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 SHANK1Q9Y566 2161 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 EXPH5Q8NEV8 1989 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 TCRBV21S2A2A0A5A6 115 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 PPP5D1E7EU14 171 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 H3BMH7 237 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 IL18BPO95998 194 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 OTX1P32242 354 aaPredicted RBP13.32□□□□□ -0.28
SMG6-207ENST00000570756 ARL4DP49703 201 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 MALLQ13021 153 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 CLN3Q13286 438 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 SPIN3Q5JUX0 258 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 TMEM211Q6ICI0 200 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 OSR2Q8N2R0 312 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 CA5BP1Q8WTZ4 195 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 TMEM18Q96B42 140 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 PYGO2Q9BRQ0 406 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 ZNF665Q9H7R5 613 aa13.32□□□□□ -0.28
SMG6-207ENST00000570756 NCOA6Q14686 2063 aaPredicted RBP13.32□□□□□ -0.28
SMG6-207ENST00000570756 TMEM265A0A087WTH1 108 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 A0A1W2PNR3 127 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 CHST1O43916 411 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 TMEM50AO95807 157 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 OPN1LWP04000 364 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 COX5BP10606 129 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 MDKP21741 143 aaPredicted RBP13.31□□□□□ -0.28
SMG6-207ENST00000570756 CCKARP32238 428 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 APLNRP35414 380 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 PDLIM4P50479 330 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 NMSQ5H8A3 153 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 ASCL4Q6XD76 172 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 LHFPL2Q6ZUX7 228 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 DNASE2BQ8WZ79 361 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 BORCS8Q96FH0 119 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 SIGLEC12Q96PQ1 595 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 OR5B12Q96R08 314 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 TPSD1Q9BZJ3 242 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 GPR27Q9NS67 375 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 NAT8Q9UHE5 227 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 M0R143 59 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 PDCD6O75340 191 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 SFTPCP11686 197 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 GNRHRP30968 328 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 CTHP32929 405 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 FAM3BP58499 235 aaPredicted RBP13.31□□□□□ -0.28
SMG6-207ENST00000570756 PIGYQ3MUY2 71 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 NCR3LG1Q68D85 454 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 BRICD5Q6PL45 260 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 TMEM92Q6UXU6 159 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 MRGPRGQ86SM5 289 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 DTX1Q86Y01 620 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 MAML2Q8IZL2 1156 aaPredicted RBP13.31□□□□□ -0.28
SMG6-207ENST00000570756 POC1BQ8TC44 478 aa13.31□□□□□ -0.28
SMG6-207ENST00000570756 SCGB1C1Q8TD33 95 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms