RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 DHRSXQ8N5I4 330 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 ZFP41Q8N8Y5 198 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 SETD9Q8NE22 299 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 OR13A1Q8NGR1 328 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 OR10K1Q8NGX5 313 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 OR2T6Q8NHC8 308 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 PLPPR1Q8TBJ4 325 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 GGHQ92820 318 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 GHSRQ92847 366 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 TMEM80Q96HE8 168 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 KIRREL1Q96J84 757 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 WNT10AQ9GZT5 417 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 NCOR1P1Q9H4R4 102 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 IFT22Q9H7X7 185 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 TMEM138Q9NPI0 162 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 FKBP14Q9NWM8 211 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 BABAM2Q9NXR7 383 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 CNOT2Q9NZN8 540 aaKnown RBP6.28□□□□□ -1.4
CDH3-209ENST00000569080 GLS2Q9UI32 602 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 ZNF281Q9Y2X9 895 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 PCDHGB5Q9Y5G0 923 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 HILPDAQ9Y5L2 63 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 HSPE1-MOB4S4R3N1 261 aa6.28□□□□□ -1.4
CDH3-209ENST00000569080 KBTBD11-OT1A0A1B0GTJ5 212 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 A0A1W2PP11 408 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 FUOMA2VDF0 154 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 ZNF729A6NN14 1252 aaPredicted RBP6.27□□□□□ -1.41
CDH3-209ENST00000569080 NPIPB11E5RHQ5 1161 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 ANKRD65E5RJM6 399 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 F2RL2O00254 374 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 DEGS1O15121 323 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 XPNPEP2O43895 674 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 GPX5O75715 221 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 CDRT1O95170 752 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 IL1AP01583 271 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 CD2P06729 351 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 MYL12AP19105 171 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 HTR1DP28221 377 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 C21orf33P30042 268 aaPredicted RBP6.27□□□□□ -1.41
CDH3-209ENST00000569080 RBM11P57052 281 aaKnown RBP6.27□□□□□ -1.41
CDH3-209ENST00000569080 SCN1BQ07699 218 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 ST3GAL4Q11206 333 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 HERPUD1Q15011 391 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 C2orf68Q2NKX9 166 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 HLA-DRB5Q30154 266 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 TMEM95Q3KNT9 176 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 PAN3Q58A45 887 aaKnown RBP6.27□□□□□ -1.41
CDH3-209ENST00000569080 YIF1BQ5BJH7 314 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 DDI2Q5TDH0 399 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 RTN4RL2Q86UN3 420 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 ABHD12Q8N2K0 398 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 NDNFQ8TB73 568 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 CPNE2Q96FN4 548 aaPredicted RBP6.27□□□□□ -1.41
CDH3-209ENST00000569080 CYYR1Q96J86 154 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 FAM192AQ9GZU8 254 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 PLCXD1Q9NUJ7 323 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 CALYQ9NYX4 217 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 OR6C3Q9NZP0 311 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 PSORS1C1Q9UIG5 152 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 KIF25Q9UIL4 384 aa6.27□□□□□ -1.41
CDH3-209ENST00000569080 EFCAB10A6NFE3 127 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 ADARB2-AS1A8MUL3 147 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 BUB1B-PAK6H3BSN5 160 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 PIN1P1O15428 100 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 AMY1AP04745 511 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 AMY2AP04746 511 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 CD1AP06126 327 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 BDKRB2P30411 391 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 SSTR5P35346 364 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 ZNF93P35789 620 aaPredicted RBP6.26□□□□□ -1.41
CDH3-209ENST00000569080 GLP1RP43220 463 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 KCNJ3P48549 501 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 BLCAPP62952 87 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 PPP3R1P63098 170 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 DEFA6Q01524 100 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 SLC34A1Q06495 639 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 RIPK1Q13546 671 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 Q499Y3 187 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 TPTE2P1Q5T6R2 138 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 OR52W1Q6IF63 320 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 AHSA2Q719I0 299 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 SATL1Q86VE3 508 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 C8orf59Q8N0T1 100 aaPredicted RBP6.26□□□□□ -1.41
CDH3-209ENST00000569080 C11orf44Q8N8P7 122 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 ZNF596Q8TC21 504 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 TFAP2CQ92754 450 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 DERL3Q96Q80 235 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 OR14A2Q96R54 314 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 GPER1Q99527 375 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 ZNF184Q99676 751 aaPredicted RBP6.26□□□□□ -1.41
CDH3-209ENST00000569080 ABCB10Q9NRK6 738 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 ING3Q9NXR8 418 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 RCC2Q9P258 522 aaKnown RBP6.26□□□□□ -1.41
CDH3-209ENST00000569080 DPM3Q9P2X0 92 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 NKX1-2Q9UD57 310 aaPredicted RBP6.26□□□□□ -1.41
CDH3-209ENST00000569080 PITPNC1Q9UKF7 332 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 ST3GAL6Q9Y274 331 aa6.26□□□□□ -1.41
CDH3-209ENST00000569080 MEIKINA0A087WXM9 373 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 TRAV39A0A0B4J263 110 aa6.25□□□□□ -1.41
CDH3-209ENST00000569080 PNMA8CA0A1B0GUJ8 204 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms