RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 ABCA2Q9BZC7 2435 aa13.82□□□□□ -0.2
COMMD4-224ENST00000568877 MALRD1Q5VYJ5 2156 aa13.82□□□□□ -0.2
COMMD4-224ENST00000568877 SOCS1O15524 211 aa13.81□□□□□ -0.2
COMMD4-224ENST00000568877 CHATP28329 748 aa13.81□□□□□ -0.2
COMMD4-224ENST00000568877 VEGFCP49767 419 aa13.81□□□□□ -0.2
COMMD4-224ENST00000568877 MEF2CQ06413 473 aaPredicted RBP13.81□□□□□ -0.2
COMMD4-224ENST00000568877 RBM39Q14498 530 aaKnown RBP13.81□□□□□ -0.2
COMMD4-224ENST00000568877 KRBOX4Q5JUW0 171 aa13.81□□□□□ -0.2
COMMD4-224ENST00000568877 NKAPLQ5M9Q1 402 aa13.81□□□□□ -0.2
COMMD4-224ENST00000568877 TMEM200BQ69YZ2 307 aa13.81□□□□□ -0.2
COMMD4-224ENST00000568877 TPRX1Q8N7U7 411 aa13.81□□□□□ -0.2
COMMD4-224ENST00000568877 OR56B1Q8NGI3 324 aa13.81□□□□□ -0.2
COMMD4-224ENST00000568877 OR5H6Q8NGV6 325 aa13.81□□□□□ -0.2
COMMD4-224ENST00000568877 NEK7Q8TDX7 302 aa13.81□□□□□ -0.2
COMMD4-224ENST00000568877 KCTD12Q96CX2 325 aaKnown RBP13.81□□□□□ -0.2
COMMD4-224ENST00000568877 COQ2Q96H96 371 aa13.81□□□□□ -0.2
COMMD4-224ENST00000568877 NEDD4LQ96PU5 975 aa13.81□□□□□ -0.2
COMMD4-224ENST00000568877 TMPRSS13Q9BYE2 586 aa13.81□□□□□ -0.2
COMMD4-224ENST00000568877 ING3Q9NXR8 418 aa13.81□□□□□ -0.2
COMMD4-224ENST00000568877 LPAR3Q9UBY5 353 aa13.81□□□□□ -0.2
COMMD4-224ENST00000568877 SPATA2Q9UM82 520 aa13.81□□□□□ -0.2
COMMD4-224ENST00000568877 ACANP16112 2415 aa13.8□□□□□ -0.2
COMMD4-224ENST00000568877 hADV38S2A0JD32 116 aa13.8□□□□□ -0.2
COMMD4-224ENST00000568877 METTL21EPA6NDL7 271 aa13.8□□□□□ -0.2
COMMD4-224ENST00000568877 FOXI3A8MTJ6 420 aaPredicted RBP13.8□□□□□ -0.2
COMMD4-224ENST00000568877 GLIPR1P48060 266 aa13.8□□□□□ -0.2
COMMD4-224ENST00000568877 ARF6P62330 175 aa13.8□□□□□ -0.2
COMMD4-224ENST00000568877 PAX5Q02548 391 aa13.8□□□□□ -0.2
COMMD4-224ENST00000568877 RSBN1Q5VWQ0 802 aaPredicted RBP13.8□□□□□ -0.2
COMMD4-224ENST00000568877 Q71RC1 249 aaPredicted RBP13.8□□□□□ -0.2
COMMD4-224ENST00000568877 C6orf201Q7Z4U5 140 aa13.8□□□□□ -0.2
COMMD4-224ENST00000568877 PLPPR1Q8TBJ4 325 aa13.8□□□□□ -0.2
COMMD4-224ENST00000568877 ATG5Q9H1Y0 275 aa13.8□□□□□ -0.2
COMMD4-224ENST00000568877 C7orf69Q9H7B7 122 aa13.8□□□□□ -0.2
COMMD4-224ENST00000568877 AUP1Q9Y679 476 aa13.8□□□□□ -0.2
COMMD4-224ENST00000568877 MED13LQ71F56 2210 aa13.8□□□□□ -0.2
COMMD4-224ENST00000568877 SMIM31A0A1B0GVY4 71 aa13.79□□□□□ -0.2
COMMD4-224ENST00000568877 A0A1W2PPH5 198 aa13.79□□□□□ -0.2
COMMD4-224ENST00000568877 ODAMA1E959 279 aa13.79□□□□□ -0.2
COMMD4-224ENST00000568877 UBE2QL1A1L167 161 aa13.79□□□□□ -0.2
COMMD4-224ENST00000568877 ZNF701M0R085 212 aaPredicted RBP13.79□□□□□ -0.2
COMMD4-224ENST00000568877 ZNF182P17025 639 aaPredicted RBP13.79□□□□□ -0.2
COMMD4-224ENST00000568877 TMEM50BP56557 158 aa13.79□□□□□ -0.2
COMMD4-224ENST00000568877 DYNC1I2Q13409 638 aaKnown RBP13.79□□□□□ -0.2
COMMD4-224ENST00000568877 ZNF273Q14593 569 aa13.79□□□□□ -0.2
COMMD4-224ENST00000568877 CR1LQ2VPA4 569 aa13.79□□□□□ -0.2
COMMD4-224ENST00000568877 SLC35E4Q6ICL7 350 aa13.79□□□□□ -0.2
COMMD4-224ENST00000568877 Q6ZTK2 550 aa13.79□□□□□ -0.2
COMMD4-224ENST00000568877 KIR3DL3Q8N743 410 aa13.79□□□□□ -0.2
COMMD4-224ENST00000568877 ACOT12Q8WYK0 555 aa13.79□□□□□ -0.2
COMMD4-224ENST00000568877 SULT4A1Q9BR01 284 aa13.79□□□□□ -0.2
COMMD4-224ENST00000568877 FAAP24Q9BTP7 215 aa13.79□□□□□ -0.2
COMMD4-224ENST00000568877 NCOR1P1Q9H4R4 102 aa13.79□□□□□ -0.2
COMMD4-224ENST00000568877 PLEKHJ1Q9NW61 149 aa13.79□□□□□ -0.2
COMMD4-224ENST00000568877 RHBDL2Q9NX52 303 aa13.79□□□□□ -0.2
COMMD4-224ENST00000568877 ETAA1Q9NY74 926 aa13.79□□□□□ -0.2
COMMD4-224ENST00000568877 NDUFA13Q9P0J0 144 aa13.79□□□□□ -0.2
COMMD4-224ENST00000568877 ONECUT1Q9UBC0 465 aa13.79□□□□□ -0.2
COMMD4-224ENST00000568877 RSL24D1Q9UHA3 163 aaKnown RBP13.79□□□□□ -0.2
COMMD4-224ENST00000568877 HSF4Q9ULV5 492 aa13.79□□□□□ -0.2
COMMD4-224ENST00000568877 ANK3Q12955 4377 aaKnown RBP13.78□□□□□ -0.2
COMMD4-224ENST00000568877 MEIKINA0A087WXM9 373 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 TMEM30CPA0ZSE6 113 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 MEX3AA1L020 520 aaKnown RBP13.78□□□□□ -0.2
COMMD4-224ENST00000568877 DPPA5A6NC42 116 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 RAB27BO00194 218 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 SOX6P35712 828 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 MOGAT2Q3SYC2 334 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 PLAC9Q5JTB6 97 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 METTL11BQ5VVY1 283 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 ZNF497Q6ZNH5 498 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 TCF23Q7RTU1 214 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 RTN4RL2Q86UN3 420 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 CMTM4Q8IZR5 234 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 OR10R2Q8NGX6 335 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 DYNC2LI1Q8TCX1 351 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 AP3S1Q92572 193 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 CORO2AQ92828 525 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 SLC25A38Q96DW6 304 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 ARHGAP5-AS1Q96IT6 56 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 CYYR1Q96J86 154 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 WDFY2Q96P53 400 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 TMEM160Q9NX00 188 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 OPN4Q9UHM6 478 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 KIF25Q9UIL4 384 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 UBE2J1Q9Y385 318 aaPredicted RBP13.78□□□□□ -0.2
COMMD4-224ENST00000568877 KPTNQ9Y664 436 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 LINC00312Q9Y6C7 94 aa13.78□□□□□ -0.2
COMMD4-224ENST00000568877 TRGV10A0A0A0MS01 117 aa13.77□□□□□ -0.21
COMMD4-224ENST00000568877 ARHGAP32A7KAX9 2087 aa13.77□□□□□ -0.21
COMMD4-224ENST00000568877 M0R1W7 72 aa13.77□□□□□ -0.21
COMMD4-224ENST00000568877 CA11O75493 328 aa13.77□□□□□ -0.21
COMMD4-224ENST00000568877 SCGNO76038 276 aa13.77□□□□□ -0.21
COMMD4-224ENST00000568877 TOX4O94842 621 aa13.77□□□□□ -0.21
COMMD4-224ENST00000568877 ABCA1O95477 2261 aa13.77□□□□□ -0.21
COMMD4-224ENST00000568877 AVPP01185 164 aa13.77□□□□□ -0.21
COMMD4-224ENST00000568877 MT-ND4P03905 459 aa13.77□□□□□ -0.21
COMMD4-224ENST00000568877 MMP9P14780 707 aa13.77□□□□□ -0.21
COMMD4-224ENST00000568877 CCL3L1P16619 93 aa13.77□□□□□ -0.21
COMMD4-224ENST00000568877 FAM120AOSQ5T036 256 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms