RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 OR52N1Q8NH53 320 aa3.86□□□□□ -1.79
CLK3-219ENST00000567805 NDNFQ8TB73 568 aa3.86□□□□□ -1.79
CLK3-219ENST00000567805 CNIH3Q8TBE1 160 aa3.86□□□□□ -1.79
CLK3-219ENST00000567805 ZNF596Q8TC21 504 aa3.86□□□□□ -1.79
CLK3-219ENST00000567805 TNFAIP8L1Q8WVP5 186 aa3.86□□□□□ -1.79
CLK3-219ENST00000567805 CYGBQ8WWM9 190 aa3.86□□□□□ -1.79
CLK3-219ENST00000567805 RGP1Q92546 391 aaPredicted RBP3.86□□□□□ -1.79
CLK3-219ENST00000567805 TMEM106AQ96A25 262 aa3.86□□□□□ -1.79
CLK3-219ENST00000567805 CREB3L1Q96BA8 519 aa3.86□□□□□ -1.79
CLK3-219ENST00000567805 ANAPC16Q96DE5 110 aa3.86□□□□□ -1.79
CLK3-219ENST00000567805 SMIM19Q96E16 107 aa3.86□□□□□ -1.79
CLK3-219ENST00000567805 TMEM80Q96HE8 168 aa3.86□□□□□ -1.79
CLK3-219ENST00000567805 GPER1Q99527 375 aa3.86□□□□□ -1.79
CLK3-219ENST00000567805 FAM192AQ9GZU8 254 aa3.86□□□□□ -1.79
CLK3-219ENST00000567805 NCOR1P1Q9H4R4 102 aa3.86□□□□□ -1.79
CLK3-219ENST00000567805 PAK1IP1Q9NWT1 392 aaPredicted RBP3.86□□□□□ -1.79
CLK3-219ENST00000567805 CHCHD3Q9NX63 227 aaKnown RBP3.86□□□□□ -1.79
CLK3-219ENST00000567805 BABAM2Q9NXR7 383 aa3.86□□□□□ -1.79
CLK3-219ENST00000567805 TAS2R4Q9NYW5 299 aa3.86□□□□□ -1.79
CLK3-219ENST00000567805 OR6C3Q9NZP0 311 aa3.86□□□□□ -1.79
CLK3-219ENST00000567805 DIMT1Q9UNQ2 313 aaKnown RBP3.86□□□□□ -1.79
CLK3-219ENST00000567805 ZNF281Q9Y2X9 895 aa3.86□□□□□ -1.79
CLK3-219ENST00000567805 EXOSC1Q9Y3B2 195 aaKnown RBP3.86□□□□□ -1.79
CLK3-219ENST00000567805 HSPE1-MOB4S4R3N1 261 aa3.86□□□□□ -1.79
CLK3-219ENST00000567805 A0A087X0M5 115 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 KBTBD11-OT1A0A1B0GTJ5 212 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 A0A1B0GX30 115 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 MEGF11A6BM72 1044 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 EFCAB10A6NFE3 127 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 ZNF729A6NN14 1252 aaPredicted RBP3.85□□□□□ -1.79
CLK3-219ENST00000567805 FAM90A22PA8MWA6 464 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 LEUTXA8MZ59 168 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 GABRPO00591 440 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 TOR1AO14656 332 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 KCNAB3O43448 404 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 MMP23AO75900 390 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 TSPAN15O95858 294 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 IGLV1-47P01700 117 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 CSF1P09603 554 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 VSIG10L2P0DP72 767 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 CD33P20138 364 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 C21orf33P30042 268 aaPredicted RBP3.85□□□□□ -1.79
CLK3-219ENST00000567805 BDKRB2P30411 391 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 BRS3P32247 399 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 ZNF93P35789 620 aaPredicted RBP3.85□□□□□ -1.79
CLK3-219ENST00000567805 CAPGP40121 348 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 CEACAM3P40198 252 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 KCNJ3P48549 501 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 RAB13P51153 203 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 PRRX1P54821 245 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 TAS2R43P59537 309 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 ADARB1P78563 741 aaKnown RBP3.85□□□□□ -1.79
CLK3-219ENST00000567805 DEFA6Q01524 100 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 SLC34A1Q06495 639 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 ST3GAL4Q11206 333 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 ATXN7L3Q14CW9 347 aaPredicted RBP3.85□□□□□ -1.79
CLK3-219ENST00000567805 RCN1Q15293 331 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 RSU1Q15404 277 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 PIGYQ3MUY2 71 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 PAN3Q58A45 887 aaKnown RBP3.85□□□□□ -1.79
CLK3-219ENST00000567805 YIF1BQ5BJH7 314 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 NHLRC3Q5JS37 347 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 OGFRL1Q5TC84 451 aaPredicted RBP3.85□□□□□ -1.79
CLK3-219ENST00000567805 DDI2Q5TDH0 399 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 PRAMEF5Q5TYX0 476 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 OR2G6Q5TZ20 316 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 DMKNQ6E0U4 476 aaPredicted RBP3.85□□□□□ -1.79
CLK3-219ENST00000567805 CCDC144NLQ6NUI1 221 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 CCBE1Q6UXH8 406 aaPredicted RBP3.85□□□□□ -1.79
CLK3-219ENST00000567805 ASCL4Q6XD76 172 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 C16orf82Q7Z2V1 217 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 LINC00596Q86U02 117 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 TMEM219Q86XT9 240 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 KRTAP19-1Q8IUB9 90 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 C8orf59Q8N0T1 100 aaPredicted RBP3.85□□□□□ -1.79
CLK3-219ENST00000567805 Q8N2B8 174 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 KLHDC1Q8N7A1 406 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 ZNF565Q8N9K5 539 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 OR51A2Q8NGJ7 313 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 CFHR4Q92496 578 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 GHSRQ92847 366 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 COQ2Q96H96 371 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 AKR1E2Q96JD6 320 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 NR1H4Q96RI1 486 aaPredicted RBP3.85□□□□□ -1.79
CLK3-219ENST00000567805 S100A13Q99584 98 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 NKX3-1Q99801 234 aaPredicted RBP3.85□□□□□ -1.79
CLK3-219ENST00000567805 BARHL1Q9BZE3 327 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 PRSS22Q9GZN4 317 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 METTL9Q9H1A3 318 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 PPIL3Q9H2H8 161 aaKnown RBP3.85□□□□□ -1.79
CLK3-219ENST00000567805 IFT22Q9H7X7 185 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 ZNF702PQ9H963 129 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 TMEM138Q9NPI0 162 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 PCDHB16Q9NRJ7 776 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 SERTAD4Q9NUC0 356 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 IL36GQ9NZH8 169 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 CNOT2Q9NZN8 540 aaKnown RBP3.85□□□□□ -1.79
CLK3-219ENST00000567805 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.85□□□□□ -1.79
CLK3-219ENST00000567805 DPM3Q9P2X0 92 aa3.85□□□□□ -1.79
CLK3-219ENST00000567805 CKLFQ9UBR5 152 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms