RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 SPAM1P38567 509 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 GPR4P46093 362 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 RAB25P57735 213 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 ZNF117Q03924 483 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 OR8G1Q15617 311 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 ZBTB6Q15916 424 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 FAM27D1Q5T7N8 215 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 GLYATQ6IB77 296 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 UGT2A3Q6UWM9 527 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 CCDC121Q6ZUS5 278 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 SETD3Q86TU7 594 aaPredicted RBP0.13□□□□□ -2.39
CDH1-211ENST00000567320 OFCC1Q8IZS5 231 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 CCDC148Q8NFR7 591 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 PDCD6IPQ8WUM4 868 aaKnown RBP0.13□□□□□ -2.39
CDH1-211ENST00000567320 KCTD4Q8WVF5 259 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 CCL17Q92583 94 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 GLT1D1Q96MS3 346 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 RILPQ96NA2 401 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 Q9BRP9 147 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 TAPBPLQ9BX59 468 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 NDUFB11Q9NX14 153 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 COL18A1P39060 1754 aa0.13□□□□□ -2.39
CDH1-211ENST00000567320 TMEM131Q92545 1883 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 CEP170Q5SW79 1584 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 POLR3AO14802 1390 aaPredicted RBP0.12□□□□□ -2.39
CDH1-211ENST00000567320 IGKV3D-7A0A0C4DH55 119 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 IGKV3OR2-268A0A0C4DH90 116 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 RNASEK-C17orf49H0YIS7 233 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 M0QXV9 152 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 UPK2O00526 184 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 DNAJB6O75190 326 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 ERLIN1O75477 346 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 OR5AL1P0C617 328 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 CECR9P0C854 216 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 PMCHP20382 165 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 SKP2Q13309 424 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 IDI1Q13907 227 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 WDR43Q15061 677 aaKnown RBP eCLIP0.12□□□□□ -2.39
CDH1-211ENST00000567320 RCN1Q15293 331 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 CLEC12AQ5QGZ9 265 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 TPGS1Q6ZTW0 290 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 C2orf91Q6ZV80 131 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 BZW1Q7L1Q6 419 aaKnown RBP0.12□□□□□ -2.39
CDH1-211ENST00000567320 KRTAP19-3Q7Z4W3 81 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 CMTM8Q8IZV2 173 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 KRTCAP2Q8N6L1 136 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 GPATCH11Q8N954 259 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 PIH1D2Q8WWB5 315 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 OLFM3Q96PB7 478 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 ANP32EQ9BTT0 268 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 PECRQ9BY49 303 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 WDR55Q9H6Y2 383 aaPredicted RBP0.12□□□□□ -2.39
CDH1-211ENST00000567320 MRPS30Q9NP92 439 aaKnown RBP0.12□□□□□ -2.39
CDH1-211ENST00000567320 C12orf4Q9NQ89 552 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 ANXA10Q9UJ72 324 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 TMCC3Q9ULS5 477 aa0.12□□□□□ -2.39
CDH1-211ENST00000567320 RBFOX3A6NFN3 312 aa0.11□□□□□ -2.39
CDH1-211ENST00000567320 M0R1B8 84 aa0.11□□□□□ -2.39
CDH1-211ENST00000567320 LPAR6P43657 344 aa0.11□□□□□ -2.39
CDH1-211ENST00000567320 RPS5P46782 204 aaKnown RBP0.11□□□□□ -2.39
CDH1-211ENST00000567320 HMGN5P82970 282 aaKnown RBP0.11□□□□□ -2.39
CDH1-211ENST00000567320 PLCXD2Q0VAA5 305 aa0.11□□□□□ -2.39
CDH1-211ENST00000567320 TOMM34Q15785 309 aaPredicted RBP0.11□□□□□ -2.39
CDH1-211ENST00000567320 UAP1Q16222 522 aaPredicted RBP0.11□□□□□ -2.39
CDH1-211ENST00000567320 ZNF791Q3KP31 576 aaPredicted RBP0.11□□□□□ -2.39
CDH1-211ENST00000567320 SYT6Q5T7P8 510 aaPredicted RBP0.11□□□□□ -2.39
CDH1-211ENST00000567320 SDIM1Q6ZPB5 146 aa0.11□□□□□ -2.39
CDH1-211ENST00000567320 CYP4Z1Q86W10 505 aa0.11□□□□□ -2.39
CDH1-211ENST00000567320 NELFCDQ8IXH7 590 aa0.11□□□□□ -2.39
CDH1-211ENST00000567320 FAM184AQ8NB25 1140 aa0.11□□□□□ -2.39
CDH1-211ENST00000567320 MRPS24Q96EL2 167 aaKnown RBP0.11□□□□□ -2.39
CDH1-211ENST00000567320 ZNF514Q96K75 400 aaPredicted RBP0.11□□□□□ -2.39
CDH1-211ENST00000567320 TSNAXQ99598 290 aaKnown RBP0.11□□□□□ -2.39
CDH1-211ENST00000567320 C11orf70Q9BRQ4 267 aa0.11□□□□□ -2.39
CDH1-211ENST00000567320 SLC25A31Q9H0C2 315 aa0.11□□□□□ -2.39
CDH1-211ENST00000567320 CYSTM1Q9H1C7 97 aa0.11□□□□□ -2.39
CDH1-211ENST00000567320 ARMC7Q9H6L4 198 aa0.11□□□□□ -2.39
CDH1-211ENST00000567320 TXNL4BQ9NX01 149 aaKnown RBP0.11□□□□□ -2.39
CDH1-211ENST00000567320 HPCAL4Q9UM19 191 aa0.11□□□□□ -2.39
CDH1-211ENST00000567320 AP3M1Q9Y2T2 418 aa0.11□□□□□ -2.39
CDH1-211ENST00000567320 IGKV3-7A0A075B6H7 116 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 DHRS12A0PJE2 317 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 ZNF701M0R085 212 aaPredicted RBP0.1□□□□□ -2.39
CDH1-211ENST00000567320 ALOX12BO75342 701 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 SOX14O95416 240 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 KLK1P06870 262 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 OR4A8P0C604 315 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 IL9P15248 144 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 PRKACAP17612 351 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 RAP1GDS1P52306 607 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 DEFA6Q01524 100 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 IFFO1Q0D2I5 559 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 C2orf80Q0P641 193 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 MMDQ15546 238 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 GOLGA7BQ2TAP0 167 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 AGTRAPQ6RW13 159 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 C10orf107Q8IVU9 208 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 OR5T3Q8NGG3 340 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 OR51A7Q8NH64 312 aa0.1□□□□□ -2.39
CDH1-211ENST00000567320 CD200R1Q8TD46 325 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms