RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 TRNT1Q96Q11 434 aaKnown RBP3.03□□□□□ -1.92
CNOT1-209ENST00000566240 BOLA2Q9H3K6 86 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 ABCB9Q9NP78 766 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 CA10Q9NS85 328 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 MS4A12Q9NXJ0 267 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 MYH8P13535 1937 aa3.03□□□□□ -1.92
CNOT1-209ENST00000566240 NAV1Q8NEY1 1877 aa3.03□□□□□ -1.93
CNOT1-209ENST00000566240 TIAM2Q8IVF5 1701 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 RTL9Q8NET4 1388 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 MYH6P13533 1939 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 IGHV1-3A0A0C4DH29 117 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 TMEM72A0PK05 275 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 OR2AT4A6NND4 320 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 ZNF850A8MQ14 1090 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 H3BQV1 296 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 CDIPTO14735 213 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 CETN3O15182 167 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 NDUFS6O75380 124 aaKnown RBP3.02□□□□□ -1.93
CNOT1-209ENST00000566240 TNFAIP8O95379 198 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 MAS1P04201 325 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 SLC35E2BP0CK96 405 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 EIF4EBP1Q13541 118 aaPredicted RBP3.02□□□□□ -1.93
CNOT1-209ENST00000566240 SYCP1Q15431 976 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 TRIP13Q15645 432 aaPredicted RBP3.02□□□□□ -1.93
CNOT1-209ENST00000566240 ZBTB6Q15916 424 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 COX19Q49B96 90 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 FAM222AQ5U5X8 452 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 PDPK2PQ6A1A2 396 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 CLEC6AQ6EIG7 209 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 ZNF101Q8IZC7 436 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 LINC00337Q8N6G1 96 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 BLNKQ8WV28 456 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 NELFBQ8WX92 580 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 C22orf15Q8WYQ4 148 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 SPIN2AQ99865 258 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 SPIN2BQ9BPZ2 258 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 ZNF649Q9BS31 505 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 MARVELD1Q9BSK0 173 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 DIABLOQ9NR28 239 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 DNAJC27Q9NZQ0 273 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 FADS3Q9Y5Q0 445 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 USH1CQ9Y6N9 552 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 CABIN1Q9Y6J0 2220 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 ATRNO75882 1429 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 RIC1Q4ADV7 1423 aa3.02□□□□□ -1.93
CNOT1-209ENST00000566240 MYH2Q9UKX2 1941 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 MED23Q9ULK4 1368 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 CACNA1SQ13698 1873 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 UBR3Q6ZT12 1888 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 ECM29Q5VYK3 1845 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 DOCK9Q9BZ29 2069 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 IGKV1-6A0A0C4DH72 117 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 C7orf66A4D0T2 115 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 VPS37CA5D8V6 355 aaPredicted RBP3.01□□□□□ -1.93
CNOT1-209ENST00000566240 GOLGA8IPA6NC78 632 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 A8MWL6 223 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 UPK1AO00322 258 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 IGKV1-39P01597 117 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 IGKV1D-39P04432 117 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 NELFEP18615 380 aaKnown RBP3.01□□□□□ -1.93
CNOT1-209ENST00000566240 SYT1P21579 422 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 GTF2H1P32780 548 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 RPA3P35244 121 aaPredicted RBP3.01□□□□□ -1.93
CNOT1-209ENST00000566240 SLC18A1P54219 525 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 MRPL52Q86TS9 123 aaKnown RBP3.01□□□□□ -1.93
CNOT1-209ENST00000566240 CYP4Z1Q86W10 505 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 OR2Z1Q8NG97 314 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 OR4K17Q8NGC6 315 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 OR2AE1Q8NHA4 323 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 CCDC12Q8WUD4 166 aaPredicted RBP3.01□□□□□ -1.93
CNOT1-209ENST00000566240 ZMYND19Q96E35 227 aaPredicted RBP3.01□□□□□ -1.93
CNOT1-209ENST00000566240 GPR82Q96P67 336 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 MED10Q9BTT4 135 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 UPF3BQ9BZI7 483 aaKnown RBP3.01□□□□□ -1.93
CNOT1-209ENST00000566240 NDEL1Q9GZM8 345 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 METTL8Q9H825 291 aaKnown RBP3.01□□□□□ -1.93
CNOT1-209ENST00000566240 PARP11Q9NR21 331 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 SDHAF3Q9NRP4 125 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 RBM22Q9NW64 420 aaKnown RBP eCLIP3.01□□□□□ -1.931e-6■■■■■ 28.1
CNOT1-209ENST00000566240 RAB22AQ9UL26 194 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 KLF13Q9Y2Y9 288 aaPredicted RBP3.01□□□□□ -1.93
CNOT1-209ENST00000566240 SNX24Q9Y343 169 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 URGCP-MRPS24S4R325 110 aa3.01□□□□□ -1.93
CNOT1-209ENST00000566240 DOCK8Q8NF50 2099 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 BRWD3Q6RI45 1802 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 ELP1O95163 1332 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 QSER1Q2KHR3 1735 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 IGKV2-28A0A075B6P5 120 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 A0A0D9SFI3 127 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 RBFOX3A6NFN3 312 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 SCN2BO60939 215 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 RCBTB2O95199 551 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 YEATS4O95619 227 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 IGKV2D-28P01615 120 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 IL4P05112 153 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 GP1BAP07359 652 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 ZNF32P17041 273 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 UGT2B10P36537 528 aa3□□□□□ -1.93
CNOT1-209ENST00000566240 AQP5P55064 265 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms