RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 RNF114Q9Y508 228 aa14.88□□□□□ -0.03
SYNGR3-204ENST00000564642 IGHV2-26A0A0B4J1V2 119 aa14.87□□□□□ -0.03
SYNGR3-204ENST00000564642 TRAV24A0A0B4J272 114 aa14.87□□□□□ -0.03
SYNGR3-204ENST00000564642 MMP23AO75900 390 aa14.87□□□□□ -0.03
SYNGR3-204ENST00000564642 CDK2P24941 298 aa14.87□□□□□ -0.03
SYNGR3-204ENST00000564642 HSPA13P48723 471 aa14.87□□□□□ -0.03
SYNGR3-204ENST00000564642 DOC2BQ14184 412 aa14.87□□□□□ -0.03
SYNGR3-204ENST00000564642 GPR176Q14439 515 aa14.87□□□□□ -0.03
SYNGR3-204ENST00000564642 SPHARQ15513 63 aa14.87□□□□□ -0.03
SYNGR3-204ENST00000564642 MED22Q15528 200 aa14.87□□□□□ -0.03
SYNGR3-204ENST00000564642 FAM189A2Q15884 450 aa14.87□□□□□ -0.03
SYNGR3-204ENST00000564642 SSX2Q16385 188 aa14.87□□□□□ -0.03
SYNGR3-204ENST00000564642 PRAMEF5Q5TYX0 476 aa14.87□□□□□ -0.03
SYNGR3-204ENST00000564642 HEPN1Q6WQI6 88 aa14.87□□□□□ -0.03
SYNGR3-204ENST00000564642 Q6ZSV7 163 aa14.87□□□□□ -0.03
SYNGR3-204ENST00000564642 JAGN1Q8N5M9 183 aa14.87□□□□□ -0.03
SYNGR3-204ENST00000564642 MS4A15Q8N5U1 240 aa14.87□□□□□ -0.03
SYNGR3-204ENST00000564642 ZNF565Q8N9K5 539 aa14.87□□□□□ -0.03
SYNGR3-204ENST00000564642 OR4D6Q8NGJ1 314 aa14.87□□□□□ -0.03
SYNGR3-204ENST00000564642 LINC01006Q8NI28 216 aa14.87□□□□□ -0.03
SYNGR3-204ENST00000564642 ABCB10Q9NRK6 738 aa14.87□□□□□ -0.03
SYNGR3-204ENST00000564642 MAGEA13PA6NCF6 341 aa14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 ZNF729A6NN14 1252 aaPredicted RBP14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 OR7C1O76099 320 aaPredicted RBP14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 GTF2F2P13984 249 aa14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 KCNJ3P48549 501 aa14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 RBM11P57052 281 aaKnown RBP14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 SLC35A2P78381 396 aa14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 SLC22A6Q4U2R8 563 aa14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 PLA1AQ53H76 456 aa14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 NHLRC3Q5JS37 347 aa14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 MINOS1Q5TGZ0 78 aa14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 IZUMO2Q6UXV1 221 aa14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 LINC00596Q86U02 117 aa14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 RTN4RL2Q86UN3 420 aa14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 CDH26Q8IXH8 852 aa14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 ABHD12Q8N2K0 398 aa14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 NDNFQ8TB73 568 aa14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 MUL1Q969V5 352 aa14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 OR5M11Q96RB7 305 aa14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 PPIL3Q9H2H8 161 aaKnown RBP14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 RAB18Q9NP72 206 aa14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 MRPS28Q9Y2Q9 187 aaKnown RBP14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 MINOS1-NBL1R4GNA1 71 aa14.86□□□□□ -0.03
SYNGR3-204ENST00000564642 MEIKINA0A087WXM9 373 aa14.85□□□□□ -0.03
SYNGR3-204ENST00000564642 PIN1P1O15428 100 aa14.85□□□□□ -0.03
SYNGR3-204ENST00000564642 ACSM3Q53FZ2 586 aa14.85□□□□□ -0.03
SYNGR3-204ENST00000564642 DYNAPQ8N1N2 210 aa14.85□□□□□ -0.03
SYNGR3-204ENST00000564642 SUMF2Q8NBJ7 301 aa14.85□□□□□ -0.03
SYNGR3-204ENST00000564642 WFDC12Q8WWY7 111 aa14.85□□□□□ -0.03
SYNGR3-204ENST00000564642 SGCDQ92629 289 aa14.85□□□□□ -0.03
SYNGR3-204ENST00000564642 TMED9Q9BVK6 235 aa14.85□□□□□ -0.03
SYNGR3-204ENST00000564642 DPCDQ9BVM2 203 aaPredicted RBP14.85□□□□□ -0.03
SYNGR3-204ENST00000564642 CCDC90BQ9GZT6 254 aa14.85□□□□□ -0.03
SYNGR3-204ENST00000564642 NCOR1P1Q9H4R4 102 aa14.85□□□□□ -0.03
SYNGR3-204ENST00000564642 C16orf95Q9H693 158 aa14.85□□□□□ -0.03
SYNGR3-204ENST00000564642 HILPDAQ9Y5L2 63 aa14.85□□□□□ -0.03
SYNGR3-204ENST00000564642 MEGF11A6BM72 1044 aa14.84□□□□□ -0.03
SYNGR3-204ENST00000564642 VGLL3A8MV65 326 aa14.84□□□□□ -0.03
SYNGR3-204ENST00000564642 GEMIN2O14893 280 aaKnown RBP14.84□□□□□ -0.03
SYNGR3-204ENST00000564642 RGS10O43665 173 aa14.84□□□□□ -0.03
SYNGR3-204ENST00000564642 TSPAN9O75954 239 aa14.84□□□□□ -0.03
SYNGR3-204ENST00000564642 HTR1DP28221 377 aa14.84□□□□□ -0.03
SYNGR3-204ENST00000564642 GLP1RP43220 463 aa14.84□□□□□ -0.03
SYNGR3-204ENST00000564642 MPV17LQ2QL34 196 aa14.84□□□□□ -0.03
SYNGR3-204ENST00000564642 ATAD3CQ5T2N8 411 aa14.84□□□□□ -0.03
SYNGR3-204ENST00000564642 AWAT2Q6E213 333 aa14.84□□□□□ -0.03
SYNGR3-204ENST00000564642 GLIPR1L1Q6UWM5 242 aa14.84□□□□□ -0.03
SYNGR3-204ENST00000564642 BAIAP2L2Q6UXY1 529 aa14.84□□□□□ -0.03
SYNGR3-204ENST00000564642 LIAT1Q6ZQX7 453 aa14.84□□□□□ -0.03
SYNGR3-204ENST00000564642 NKAIN3Q8N8D7 197 aa14.84□□□□□ -0.03
SYNGR3-204ENST00000564642 ZNF596Q8TC21 504 aa14.84□□□□□ -0.03
SYNGR3-204ENST00000564642 PIFOQ8TCI5 191 aa14.84□□□□□ -0.03
SYNGR3-204ENST00000564642 DUSP21Q9H596 190 aa14.84□□□□□ -0.03
SYNGR3-204ENST00000564642 IFT22Q9H7X7 185 aa14.84□□□□□ -0.03
SYNGR3-204ENST00000564642 TCF7L1Q9HCS4 588 aa14.84□□□□□ -0.03
SYNGR3-204ENST00000564642 KIF25Q9UIL4 384 aa14.84□□□□□ -0.03
SYNGR3-204ENST00000564642 LSM2Q9Y333 95 aaKnown RBP14.84□□□□□ -0.03
SYNGR3-204ENST00000564642 KBTBD11-OT1A0A1B0GTJ5 212 aa14.83□□□□□ -0.04
SYNGR3-204ENST00000564642 A0A1W2PP11 408 aa14.83□□□□□ -0.04
SYNGR3-204ENST00000564642 FAM172BPA6NC97 362 aa14.83□□□□□ -0.04
SYNGR3-204ENST00000564642 TOR1AO14656 332 aa14.83□□□□□ -0.04
SYNGR3-204ENST00000564642 NFYBP25208 207 aa14.83□□□□□ -0.04
SYNGR3-204ENST00000564642 RAB13P51153 203 aa14.83□□□□□ -0.04
SYNGR3-204ENST00000564642 PRRX1P54821 245 aa14.83□□□□□ -0.04
SYNGR3-204ENST00000564642 GPR50Q13585 617 aa14.83□□□□□ -0.04
SYNGR3-204ENST00000564642 IRF3Q14653 427 aa14.83□□□□□ -0.04
SYNGR3-204ENST00000564642 C17orf58Q2M2W7 97 aa14.83□□□□□ -0.04
SYNGR3-204ENST00000564642 LDLRAD2Q5SZI1 272 aa14.83□□□□□ -0.04
SYNGR3-204ENST00000564642 RSBN1Q5VWQ0 802 aaPredicted RBP14.83□□□□□ -0.04
SYNGR3-204ENST00000564642 SLC35E4Q6ICL7 350 aa14.83□□□□□ -0.04
SYNGR3-204ENST00000564642 BRICD5Q6PL45 260 aa14.83□□□□□ -0.04
SYNGR3-204ENST00000564642 UNQ9370/PRO34162Q6UXP9 181 aa14.83□□□□□ -0.04
SYNGR3-204ENST00000564642 UFD1Q92890 307 aa14.83□□□□□ -0.04
SYNGR3-204ENST00000564642 CNBD2Q96M20 576 aa14.83□□□□□ -0.04
SYNGR3-204ENST00000564642 ATP6V1G2O95670 118 aa14.82□□□□□ -0.04
SYNGR3-204ENST00000564642 HSMCR30P0CW71 290 aa14.82□□□□□ -0.04
SYNGR3-204ENST00000564642 CRHBPP24387 322 aa14.82□□□□□ -0.04
SYNGR3-204ENST00000564642 GDNFP39905 211 aa14.82□□□□□ -0.04
SYNGR3-204ENST00000564642 SRSF4Q08170 494 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms