RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 RAG2P55895 527 aa11.13□□□□□ -0.63
CNOT1-206ENST00000564557 DLX6P56179 175 aa11.13□□□□□ -0.63
CNOT1-206ENST00000564557 GPR50Q13585 617 aa11.13□□□□□ -0.63
CNOT1-206ENST00000564557 PIGYQ3MUY2 71 aa11.13□□□□□ -0.63
CNOT1-206ENST00000564557 RBM48Q5RL73 367 aaKnown RBP11.13□□□□□ -0.63
CNOT1-206ENST00000564557 AWAT2Q6E213 333 aa11.13□□□□□ -0.63
CNOT1-206ENST00000564557 DHRS7BQ6IAN0 325 aaPredicted RBP11.13□□□□□ -0.63
CNOT1-206ENST00000564557 ASCL4Q6XD76 172 aa11.13□□□□□ -0.63
CNOT1-206ENST00000564557 LINC00596Q86U02 117 aa11.13□□□□□ -0.63
CNOT1-206ENST00000564557 CDH26Q8IXH8 852 aa11.13□□□□□ -0.63
CNOT1-206ENST00000564557 NKAIN3Q8N8D7 197 aa11.13□□□□□ -0.63
CNOT1-206ENST00000564557 OR4D6Q8NGJ1 314 aa11.13□□□□□ -0.63
CNOT1-206ENST00000564557 NEK7Q8TDX7 302 aa11.13□□□□□ -0.63
CNOT1-206ENST00000564557 MUL1Q969V5 352 aa11.13□□□□□ -0.63
CNOT1-206ENST00000564557 SLITRK2Q9H156 845 aa11.13□□□□□ -0.63
CNOT1-206ENST00000564557 DUSP21Q9H596 190 aa11.13□□□□□ -0.63
CNOT1-206ENST00000564557 ABCB10Q9NRK6 738 aa11.13□□□□□ -0.63
CNOT1-206ENST00000564557 TAS2R3Q9NYW6 316 aa11.13□□□□□ -0.63
CNOT1-206ENST00000564557 IL36GQ9NZH8 169 aa11.13□□□□□ -0.63
CNOT1-206ENST00000564557 VPREB3Q9UKI3 123 aa11.13□□□□□ -0.63
CNOT1-206ENST00000564557 MRPS28Q9Y2Q9 187 aaKnown RBP11.13□□□□□ -0.63
CNOT1-206ENST00000564557 TBL2Q9Y4P3 447 aaKnown RBP11.13□□□□□ -0.63
CNOT1-206ENST00000564557 MEIKINA0A087WXM9 373 aa11.12□□□□□ -0.63
CNOT1-206ENST00000564557 H3BUI4 141 aa11.12□□□□□ -0.63
CNOT1-206ENST00000564557 H3BUX3 64 aa11.12□□□□□ -0.63
CNOT1-206ENST00000564557 CRHBPP24387 322 aa11.12□□□□□ -0.63
CNOT1-206ENST00000564557 KCNJ3P48549 501 aa11.12□□□□□ -0.63
CNOT1-206ENST00000564557 LRRC75BQ2VPJ9 315 aa11.12□□□□□ -0.63
CNOT1-206ENST00000564557 ATAD3CQ5T2N8 411 aa11.12□□□□□ -0.63
CNOT1-206ENST00000564557 LIPKQ5VXJ0 399 aa11.12□□□□□ -0.63
CNOT1-206ENST00000564557 GLIPR1L1Q6UWM5 242 aa11.12□□□□□ -0.63
CNOT1-206ENST00000564557 PRSS48Q7RTY5 328 aa11.12□□□□□ -0.63
CNOT1-206ENST00000564557 CEACAM19Q7Z692 300 aa11.12□□□□□ -0.63
CNOT1-206ENST00000564557 NDNFQ8TB73 568 aa11.12□□□□□ -0.63
CNOT1-206ENST00000564557 SGCDQ92629 289 aa11.12□□□□□ -0.63
CNOT1-206ENST00000564557 CORO2AQ92828 525 aa11.12□□□□□ -0.63
CNOT1-206ENST00000564557 FOXRED1Q96CU9 486 aaPredicted RBP11.12□□□□□ -0.63
CNOT1-206ENST00000564557 CLEC7AQ9BXN2 247 aa11.12□□□□□ -0.63
CNOT1-206ENST00000564557 MEGF9Q9H1U4 602 aa11.12□□□□□ -0.63
CNOT1-206ENST00000564557 TMEM133Q9H2Q1 129 aa11.12□□□□□ -0.63
CNOT1-206ENST00000564557 DNHD1Q96M86 4753 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 TRAV24A0A0B4J272 114 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 MAGEA13PA6NCF6 341 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 TOR1AO14656 332 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 CDK2P24941 298 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 GLP1RP43220 463 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 RBM11P57052 281 aaKnown RBP11.11□□□□□ -0.63
CNOT1-206ENST00000564557 TRAM1Q15629 374 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 FAM189A2Q15884 450 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 LY6EQ16553 131 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 TAF9Q16594 264 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 MPV17LQ2QL34 196 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 HSD17B12Q53GQ0 312 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 GLT8D1Q68CQ7 371 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 SHISA2Q6UWI4 295 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 TCF23Q7RTU1 214 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 SUMF2Q8NBJ7 301 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 Q8NFD4 153 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 OR11H6Q8NGC7 330 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 MALSU1Q96EH3 234 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 MRPS24Q96EL2 167 aaKnown RBP11.11□□□□□ -0.63
CNOT1-206ENST00000564557 UQCC2Q9BRT2 126 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 DPCDQ9BVM2 203 aaPredicted RBP11.11□□□□□ -0.63
CNOT1-206ENST00000564557 SPACA1Q9HBV2 294 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 RAB18Q9NP72 206 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 C1RLQ9NZP8 487 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 LSM2Q9Y333 95 aaKnown RBP11.11□□□□□ -0.63
CNOT1-206ENST00000564557 STAB1Q9NY15 2570 aa11.11□□□□□ -0.63
CNOT1-206ENST00000564557 DSCAML1Q8TD84 2053 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 IGHV2-26A0A0B4J1V2 119 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 ZNF729A6NN14 1252 aaPredicted RBP11.1□□□□□ -0.63
CNOT1-206ENST00000564557 GEMIN2O14893 280 aaKnown RBP11.1□□□□□ -0.63
CNOT1-206ENST00000564557 PIN1P1O15428 100 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 CRTAPO75718 401 aaPredicted RBP11.1□□□□□ -0.63
CNOT1-206ENST00000564557 NDUFA7O95182 113 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 MDKP21741 143 aaPredicted RBP11.1□□□□□ -0.63
CNOT1-206ENST00000564557 PSMA1P25786 263 aaKnown RBP11.1□□□□□ -0.63
CNOT1-206ENST00000564557 RBM39Q14498 530 aaKnown RBP11.1□□□□□ -0.63
CNOT1-206ENST00000564557 IRF3Q14653 427 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 SSX2Q16385 188 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 AANATQ16613 207 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 PLA1AQ53H76 456 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 KIAA2026Q5HYC2 2103 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 NHLRC3Q5JS37 347 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 MINOS1Q5TGZ0 78 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 PRAMEF5Q5TYX0 476 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 ZNF626Q68DY1 528 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 HEPN1Q6WQI6 88 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 LHFPL4Q7Z7J7 247 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 RTN4RL2Q86UN3 420 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 LINC00528Q8N1L1 170 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 ABHD12Q8N2K0 398 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 ZNF596Q8TC21 504 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 C17orf50Q8WW18 174 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 TAF15Q92804 592 aaKnown RBP eCLIP11.1□□□□□ -0.63
CNOT1-206ENST00000564557 TMEM203Q969S6 136 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 COQ2Q96H96 371 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 ZNF747Q9BV97 191 aa11.1□□□□□ -0.63
CNOT1-206ENST00000564557 PPIL3Q9H2H8 161 aaKnown RBP11.1□□□□□ -0.63
CNOT1-206ENST00000564557 ISYNA1Q9NPH2 558 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms