RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 EAF1Q96JC9 268 aaPredicted RBP7.67□□□□□ -1.18
HDGFL3-204ENST00000563790 OR8B4Q96RC9 309 aa7.67□□□□□ -1.18
HDGFL3-204ENST00000563790 RASL11BQ9BPW5 248 aa7.67□□□□□ -1.18
HDGFL3-204ENST00000563790 COPS4Q9BT78 406 aa7.67□□□□□ -1.18
HDGFL3-204ENST00000563790 IFT27Q9BW83 186 aa7.67□□□□□ -1.18
HDGFL3-204ENST00000563790 RANGRFQ9HD47 186 aaPredicted RBP7.67□□□□□ -1.18
HDGFL3-204ENST00000563790 DCAF13Q9NV06 445 aaKnown RBP7.67□□□□□ -1.18
HDGFL3-204ENST00000563790 INTS9Q9NV88 658 aaKnown RBP7.67□□□□□ -1.18
HDGFL3-204ENST00000563790 GID8Q9NWU2 228 aa7.67□□□□□ -1.18
HDGFL3-204ENST00000563790 ABCD2Q9UBJ2 740 aa7.67□□□□□ -1.18
HDGFL3-204ENST00000563790 KLHDC2Q9Y2U9 406 aa7.67□□□□□ -1.18
HDGFL3-204ENST00000563790 TMEM210A6NLX4 147 aa7.66□□□□□ -1.18
HDGFL3-204ENST00000563790 ZNF878C9JN71 531 aa7.66□□□□□ -1.18
HDGFL3-204ENST00000563790 SOX15O60248 233 aa7.66□□□□□ -1.18
HDGFL3-204ENST00000563790 CST4P01036 141 aa7.66□□□□□ -1.18
HDGFL3-204ENST00000563790 HLA-DQA2P01906 255 aa7.66□□□□□ -1.18
HDGFL3-204ENST00000563790 CLUP10909 449 aa7.66□□□□□ -1.18
HDGFL3-204ENST00000563790 OPRL1P41146 370 aa7.66□□□□□ -1.18
HDGFL3-204ENST00000563790 CX3CR1P49238 355 aa7.66□□□□□ -1.18
HDGFL3-204ENST00000563790 CYP4Z1Q86W10 505 aa7.66□□□□□ -1.18
HDGFL3-204ENST00000563790 SLC37A3Q8NCC5 494 aa7.66□□□□□ -1.18
HDGFL3-204ENST00000563790 TRMT10AQ8TBZ6 339 aaKnown RBP7.66□□□□□ -1.18
HDGFL3-204ENST00000563790 SRSF8Q9BRL6 282 aaKnown RBP7.66□□□□□ -1.18
HDGFL3-204ENST00000563790 PAPOLGQ9BWT3 736 aaKnown RBP7.66□□□□□ -1.18
HDGFL3-204ENST00000563790 BRD7Q9NPI1 651 aa7.66□□□□□ -1.18
HDGFL3-204ENST00000563790 LINC00312Q9Y6C7 94 aa7.66□□□□□ -1.18
HDGFL3-204ENST00000563790 DEFB131BA0A096LNP1 70 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 ZNF593O00488 134 aaPredicted RBP7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 GYPBP06028 91 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 EDDM3BP56851 147 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 ZNF121P58317 390 aaPredicted RBP7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 FAM3BP58499 235 aaPredicted RBP7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 TSPAN31Q12999 210 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 PRDX4Q13162 271 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 DYRK1AQ13627 763 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 ARPINQ7Z6K5 226 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 OR8H3Q8N146 312 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 PROKR2Q8NFJ6 384 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 OR13C5Q8NGS8 318 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 OR2T4Q8NH00 348 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 OR11H2Q8NH07 326 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 RHOVQ96L33 236 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 S1PR3Q99500 378 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 MICU1Q9BPX6 476 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 BTBD10Q9BSF8 475 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 OR51I2Q9H344 312 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 ZNF286AQ9HBT8 521 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 CENPMQ9NSP4 180 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 IL20Q9NYY1 176 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 AP3M1Q9Y2T2 418 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 N6AMT1Q9Y5N5 214 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 MPC1Q9Y5U8 109 aa7.65□□□□□ -1.18
HDGFL3-204ENST00000563790 TRAV41A0A0B4J266 112 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 hADV38S2A0JD32 116 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 FAM172BPA6NC97 362 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 TOR1AO14656 332 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 MAGEB3O15480 346 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 TBX1O43435 398 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 MT1HL1P0DM35 61 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 SPI1P17947 270 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 FUSP35637 526 aaKnown RBP eCLIP7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 MAP2K3P46734 347 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 GRB2P62993 217 aaKnown RBP7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 CRMP1Q14194 572 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 RBM39Q14498 530 aaKnown RBP7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 MAPRE2Q15555 327 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 DEFB114Q30KQ6 69 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 ZNF660Q6AZW8 331 aaPredicted RBP7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 FAM57BQ71RH2 274 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 HDXQ7Z353 690 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 KCTD20Q7Z5Y7 419 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 CSNK2A3Q8NEV1 391 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 OR4C15Q8NGM1 316 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 CASTOR1Q8WTX7 329 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 DYDC1Q8WWB3 177 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 AQP3Q92482 292 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 ABHD6Q9BV23 337 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 RTL8AQ9BWD3 113 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 RASL12Q9NYN1 266 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 CDH10Q9Y6N8 788 aa7.64□□□□□ -1.19
HDGFL3-204ENST00000563790 A0A0B4J203 849 aa7.63□□□□□ -1.19
HDGFL3-204ENST00000563790 ATP6V0E1O15342 81 aa7.63□□□□□ -1.19
HDGFL3-204ENST00000563790 OR2A4O95047 310 aa7.63□□□□□ -1.19
HDGFL3-204ENST00000563790 GADD45GO95257 159 aa7.63□□□□□ -1.19
HDGFL3-204ENST00000563790 GPM6AP51674 278 aa7.63□□□□□ -1.19
HDGFL3-204ENST00000563790 HMGA2P52926 109 aa7.63□□□□□ -1.19
HDGFL3-204ENST00000563790 PRRX1P54821 245 aa7.63□□□□□ -1.19
HDGFL3-204ENST00000563790 SF3A3Q12874 501 aaKnown RBP eCLIP7.63□□□□□ -1.19
HDGFL3-204ENST00000563790 SMIM21Q3B7S5 101 aa7.63□□□□□ -1.19
HDGFL3-204ENST00000563790 GSG1LQ6UXU4 331 aa7.63□□□□□ -1.19
HDGFL3-204ENST00000563790 HACD2Q6Y1H2 254 aa7.63□□□□□ -1.19
HDGFL3-204ENST00000563790 TIGD4Q8IY51 512 aa7.63□□□□□ -1.19
HDGFL3-204ENST00000563790 IZUMO1Q8IYV9 350 aa7.63□□□□□ -1.19
HDGFL3-204ENST00000563790 SVOPQ8N4V2 548 aa7.63□□□□□ -1.19
HDGFL3-204ENST00000563790 LINC00471Q8N535 108 aa7.63□□□□□ -1.19
HDGFL3-204ENST00000563790 OR52B4Q8NGK2 314 aa7.63□□□□□ -1.19
HDGFL3-204ENST00000563790 RP9Q8TA86 221 aaKnown RBP7.63□□□□□ -1.19
HDGFL3-204ENST00000563790 FAM162AQ96A26 154 aa7.63□□□□□ -1.19
HDGFL3-204ENST00000563790 RNF170Q96K19 258 aa7.63□□□□□ -1.19
HDGFL3-204ENST00000563790 SCRT1Q9BWW7 348 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms