RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 TAS2R16Q9NYV7 291 aa3.69□□□□□ -1.82
LINC00254-201ENST00000563416 IL36GQ9NZH8 169 aa3.69□□□□□ -1.82
LINC00254-201ENST00000563416 RIMS3Q9UJD0 308 aa3.69□□□□□ -1.82
LINC00254-201ENST00000563416 ZNF229Q9UJW7 825 aa3.69□□□□□ -1.82
LINC00254-201ENST00000563416 IKZF2Q9UKS7 526 aa3.69□□□□□ -1.82
LINC00254-201ENST00000563416 USF3Q68DE3 2245 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 TEP1Q99973 2627 aaKnown RBP3.68□□□□□ -1.82
LINC00254-201ENST00000563416 DOCK11Q5JSL3 2073 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 ABCA2Q9BZC7 2435 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 A0A1W2PPE3 182 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 OR5H1A6NKK0 313 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 RPL36A-HNRNPH2H7BZ11 118 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 PLPP3O14495 311 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 FFAR1O14842 300 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 LYZL6O75951 148 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 ZNF682O95780 498 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 IGHG1P01857 330 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 S100A9P06702 114 aaKnown RBP3.68□□□□□ -1.82
LINC00254-201ENST00000563416 ZNF43P17038 809 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 PTNP21246 168 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 IL32P24001 234 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 OTX1P32242 354 aaPredicted RBP3.68□□□□□ -1.82
LINC00254-201ENST00000563416 RPL4P36578 427 aaKnown RBP3.68□□□□□ -1.82
LINC00254-201ENST00000563416 ETV1P50549 477 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 MNAT1P51948 309 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 VLDLRP98155 873 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 PUDPQ08623 228 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 ST3GAL3Q11203 375 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 RAB40BQ12829 278 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 TSC22D1Q15714 1073 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 STK11Q15831 433 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 GABRA6Q16445 453 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 BEX5Q5H9J7 111 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 ZNF506Q5JVG8 444 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 TIMM23BQ5SRD1 257 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 GLYATQ6IB77 296 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 LCN8Q6JVE9 175 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 PAMR1Q6UXH9 720 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 BHLHA15Q7RTS1 189 aaPredicted RBP3.68□□□□□ -1.82
LINC00254-201ENST00000563416 AAED1Q7RTV5 226 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 SLC35F2Q8IXU6 374 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 ZNF100Q8IYN0 542 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 DEFB107AQ8IZN7 70 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 C17orf78Q8N4C9 275 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 FAM86B1Q8N7N1 296 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 BEST4Q8NFU0 473 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 OR5J2Q8NH18 312 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 CNIH3Q8TBE1 160 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 TMEM239Q8WW34 195 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 S100PBPQ96BU1 408 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 OR2M2Q96R28 347 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 NIPSNAP3BQ9BS92 247 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 SLITRK2Q9H156 845 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 ANKRD19PQ9H560 264 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 POLE4Q9NR33 117 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 NANSQ9NR45 359 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 TAS2R5Q9NYW4 299 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 ADA2Q9NZK5 511 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 SPATA2Q9UM82 520 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 PRPF19Q9UMS4 504 aaKnown RBP3.68□□□□□ -1.82
LINC00254-201ENST00000563416 SAMD4AQ9UPU9 718 aaKnown RBP3.68□□□□□ -1.82
LINC00254-201ENST00000563416 AK6Q9Y3D8 172 aaKnown RBP3.68□□□□□ -1.82
LINC00254-201ENST00000563416 ENPP4Q9Y6X5 453 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 ACANP16112 2415 aa3.68□□□□□ -1.82
LINC00254-201ENST00000563416 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.67□□□□□ -1.82
LINC00254-201ENST00000563416 NSD1Q96L73 2696 aaPredicted RBP3.67□□□□□ -1.82
LINC00254-201ENST00000563416 A0A087WUU8 490 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 CCDC182A6NF36 153 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 RPL37AP8A6NKH3 93 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 KLLNB2CW77 178 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 CENPBD1B2RD01 187 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 KPNA4O00629 521 aaPredicted RBP3.67□□□□□ -1.82
LINC00254-201ENST00000563416 OR7A10O76100 309 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 DIRAS1O95057 198 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 CA1P00915 261 aaPredicted RBP3.67□□□□□ -1.82
LINC00254-201ENST00000563416 CST1P01037 141 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 IGHV3-9P01782 118 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 IGHMP01871 453 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 SNRPCP09234 159 aaKnown RBP3.67□□□□□ -1.82
LINC00254-201ENST00000563416 DNAH10OSP0CZ25 163 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 NQO1P15559 274 aaKnown RBP3.67□□□□□ -1.82
LINC00254-201ENST00000563416 TCN1P20061 433 aaPredicted RBP3.67□□□□□ -1.82
LINC00254-201ENST00000563416 ATP6V1B2P21281 511 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 IFNA8P32881 189 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 MAGEA2P43356 314 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 RAB9AP51151 201 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 ZNF133P52736 654 aaPredicted RBP3.67□□□□□ -1.82
LINC00254-201ENST00000563416 TGFBR3Q03167 851 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 PRKCDQ05655 676 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 RPL18Q07020 188 aaKnown RBP3.67□□□□□ -1.82
LINC00254-201ENST00000563416 PMS2P3Q13401 168 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 DGCR6Q14129 220 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 TRAM2Q15035 370 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 NCMAPQ5T1S8 102 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 LINC00242Q5T6M2 205 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 AADACL4Q5VUY2 407 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 OLFML2AQ68BL7 652 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 LEMD1Q68G75 181 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 OR8G2PQ6IF36 304 aa3.67□□□□□ -1.82
LINC00254-201ENST00000563416 MBOAT2Q6ZWT7 520 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms