RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 TEX12Q9BXU0 123 aa9.14□□□□□ -0.95
NSMCE1-202ENST00000561960 ALX4Q9H161 411 aaPredicted RBP9.14□□□□□ -0.95
NSMCE1-202ENST00000561960 GNB4Q9HAV0 340 aa9.14□□□□□ -0.95
NSMCE1-202ENST00000561960 ZFP57Q9NU63 452 aa9.14□□□□□ -0.95
NSMCE1-202ENST00000561960 NDE1Q9NXR1 346 aa9.14□□□□□ -0.95
NSMCE1-202ENST00000561960 H2AFY2Q9P0M6 372 aaPredicted RBP9.14□□□□□ -0.95
NSMCE1-202ENST00000561960 ALMS1Q8TCU4 4167 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 IGHV3-43A0A0B4J1X8 118 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 LCE6AA0A183 80 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 METTL15A6NJ78 407 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 DEGS1O15121 323 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 IGHG2P01859 326 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 IGHV3-43DP0DP04 118 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 ATF1P18846 271 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 MYF6P23409 242 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 GPR50Q13585 617 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 SRSF7Q16629 238 aaKnown RBP eCLIP9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 SPIN3Q5JUX0 258 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 AADACL4Q5VUY2 407 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 CCDC144NLQ6NUI1 221 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 Q6ZSR3 168 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 Q8IYB0 196 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 OR11H1Q8NG94 326 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 OR10K1Q8NGX5 313 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 OR10X1Q8NGY0 326 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 OR8U1Q8NH10 309 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 PLPPR1Q8TBJ4 325 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 CASTOR1Q8WTX7 329 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 CORO2AQ92828 525 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 UTP4Q969X6 686 aaKnown RBP9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 RNF166Q96A37 237 aaPredicted RBP9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 THTPAQ9BU02 230 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 TAS2R3Q9NYW6 316 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 ARL2BPQ9Y2Y0 163 aa9.13□□□□□ -0.95
NSMCE1-202ENST00000561960 KBTBD11-OT1A0A1B0GTJ5 212 aa9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 TRIM64CA6NLI5 447 aa9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 ZNF729A6NN14 1252 aaPredicted RBP9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 DHRS7CA6NNS2 312 aa9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 H0YJX3 145 aa9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 HSD17B6O14756 317 aa9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 SERPINA3P01011 423 aa9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 FRMD6-AS1P0C7T7 363 aa9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 SLC2A2P11168 524 aaPredicted RBP9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 ANXA8P13928 327 aa9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 NANOS3P60323 173 aaKnown RBP9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 ACTR3P61158 418 aa9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 GNB1P62873 340 aa9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 GNGT1P63211 74 aa9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 MADCAM1Q13477 382 aa9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 CDK5R1Q15078 307 aa9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 PAN3Q58A45 887 aaKnown RBP9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 CXorf66Q5JRM2 361 aaPredicted RBP9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 ASPHD1Q5U4P2 390 aa9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 TEX38Q6PEX7 206 aa9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 TMEM163Q8TC26 289 aa9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 ASB9Q96DX5 294 aa9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 CYYR1Q96J86 154 aa9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 EAF1Q96JC9 268 aaPredicted RBP9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 OPALINQ96PE5 141 aa9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 IDI2-AS1Q9NZ38 188 aa9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 AMMECR1Q9Y4X0 333 aaPredicted RBP9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 WSB1Q9Y6I7 421 aa9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 SMAD5-AS1Q9Y6J3 95 aa9.12□□□□□ -0.95
NSMCE1-202ENST00000561960 IGHV1-3A0A0C4DH29 117 aa9.11□□□□□ -0.95
NSMCE1-202ENST00000561960 CCRL2O00421 344 aa9.11□□□□□ -0.95
NSMCE1-202ENST00000561960 FKBP6O75344 327 aa9.11□□□□□ -0.95
NSMCE1-202ENST00000561960 ZFPL1O95159 310 aa9.11□□□□□ -0.95
NSMCE1-202ENST00000561960 HCKP08631 526 aa9.11□□□□□ -0.95
NSMCE1-202ENST00000561960 TMEM225BP0DP42 221 aa9.11□□□□□ -0.95
NSMCE1-202ENST00000561960 SPNP16150 400 aa9.11□□□□□ -0.95
NSMCE1-202ENST00000561960 POLR2IP36954 125 aaKnown RBP9.11□□□□□ -0.95
NSMCE1-202ENST00000561960 F2RL1P55085 397 aa9.11□□□□□ -0.95
NSMCE1-202ENST00000561960 ZNF85Q03923 595 aa9.11□□□□□ -0.95
NSMCE1-202ENST00000561960 PNLIPRP3Q17RR3 467 aa9.11□□□□□ -0.95
NSMCE1-202ENST00000561960 PIGYQ3MUY2 71 aa9.11□□□□□ -0.95
NSMCE1-202ENST00000561960 SPATS1Q496A3 300 aa9.11□□□□□ -0.95
NSMCE1-202ENST00000561960 LHFPL2Q6ZUX7 228 aa9.11□□□□□ -0.95
NSMCE1-202ENST00000561960 Q8N9W7 124 aa9.11□□□□□ -0.95
NSMCE1-202ENST00000561960 OR13C3Q8NGS6 347 aa9.11□□□□□ -0.95
NSMCE1-202ENST00000561960 NSL1Q96IY1 281 aa9.11□□□□□ -0.95
NSMCE1-202ENST00000561960 OSBPL10Q9BXB5 764 aa9.11□□□□□ -0.95
NSMCE1-202ENST00000561960 KRTAP17-1Q9BYP8 105 aa9.11□□□□□ -0.95
NSMCE1-202ENST00000561960 COMMD4Q9H0A8 199 aa9.11□□□□□ -0.95
NSMCE1-202ENST00000561960 KLK15Q9H2R5 256 aa9.11□□□□□ -0.95
NSMCE1-202ENST00000561960 ISYNA1Q9NPH2 558 aa9.11□□□□□ -0.95
NSMCE1-202ENST00000561960 A0A087X0M5 115 aa9.1□□□□□ -0.95
NSMCE1-202ENST00000561960 TRAV24A0A0B4J272 114 aa9.1□□□□□ -0.95
NSMCE1-202ENST00000561960 A0A1B0GX30 115 aa9.1□□□□□ -0.95
NSMCE1-202ENST00000561960 FUOMA2VDF0 154 aa9.1□□□□□ -0.95
NSMCE1-202ENST00000561960 G3V318 75 aa9.1□□□□□ -0.95
NSMCE1-202ENST00000561960 AP4M1O00189 453 aa9.1□□□□□ -0.95
NSMCE1-202ENST00000561960 SLC31A2O15432 143 aa9.1□□□□□ -0.95
NSMCE1-202ENST00000561960 DCTN3O75935 186 aa9.1□□□□□ -0.95
NSMCE1-202ENST00000561960 KDM4BO94953 1096 aa9.1□□□□□ -0.95
NSMCE1-202ENST00000561960 T-ENOLP0DO92 83 aa9.1□□□□□ -0.95
NSMCE1-202ENST00000561960 CHATP28329 748 aa9.1□□□□□ -0.95
NSMCE1-202ENST00000561960 SLURP1P55000 103 aa9.1□□□□□ -0.95
NSMCE1-202ENST00000561960 CDC42P60953 191 aa9.1□□□□□ -0.95
NSMCE1-202ENST00000561960 KIR2DS1Q14954 304 aa9.1□□□□□ -0.95
NSMCE1-202ENST00000561960 NXNL2Q5VZ03 156 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms