RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 MIR7-3HGQ8N6C7 128 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 OR8K3Q8NH51 312 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 C19orf60Q96EN9 201 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 ADTRPQ96IZ2 230 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 DHX35Q9H5Z1 703 aaKnown RBP3.43□□□□□ -1.86
SMG1-204ENST00000561940 VCX3AQ9NNX9 186 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 ZFHX4Q86UP3 3567 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 ELP1O95163 1332 aa3.43□□□□□ -1.86
SMG1-204ENST00000561940 USP9XQ93008 2570 aaPredicted RBP3.42□□□□□ -1.86
SMG1-204ENST00000561940 LHBP01229 141 aa3.42□□□□□ -1.86
SMG1-204ENST00000561940 CELP19835 753 aa3.42□□□□□ -1.86
SMG1-204ENST00000561940 CCNOP22674 350 aa3.42□□□□□ -1.86
SMG1-204ENST00000561940 P2RY2P41231 377 aa3.42□□□□□ -1.86
SMG1-204ENST00000561940 LAMTOR4Q0VGL1 99 aa3.42□□□□□ -1.86
SMG1-204ENST00000561940 SP6Q3SY56 376 aa3.42□□□□□ -1.86
SMG1-204ENST00000561940 FBXO48Q5FWF7 155 aa3.42□□□□□ -1.86
SMG1-204ENST00000561940 ORMDL3Q8N138 153 aa3.42□□□□□ -1.86
SMG1-204ENST00000561940 CA13Q8N1Q1 262 aa3.42□□□□□ -1.86
SMG1-204ENST00000561940 ATPAF2Q8N5M1 289 aa3.42□□□□□ -1.86
SMG1-204ENST00000561940 LINC00337Q8N6G1 96 aa3.42□□□□□ -1.86
SMG1-204ENST00000561940 OR5M1Q8NGP8 315 aa3.42□□□□□ -1.86
SMG1-204ENST00000561940 OR6N2Q8NGY6 317 aa3.42□□□□□ -1.86
SMG1-204ENST00000561940 ZNF420Q8TAQ5 688 aaPredicted RBP3.42□□□□□ -1.86
SMG1-204ENST00000561940 LRRC20Q8TCA0 184 aa3.42□□□□□ -1.86
SMG1-204ENST00000561940 ZFAND1Q8TCF1 268 aa3.42□□□□□ -1.86
SMG1-204ENST00000561940 ZNF649Q9BS31 505 aa3.42□□□□□ -1.86
SMG1-204ENST00000561940 RAB23Q9ULC3 237 aa3.42□□□□□ -1.86
SMG1-204ENST00000561940 TFR2Q9UP52 801 aa3.42□□□□□ -1.86
SMG1-204ENST00000561940 SPTBN2O15020 2390 aa3.42□□□□□ -1.86
SMG1-204ENST00000561940 USP24Q9UPU5 2620 aa3.42□□□□□ -1.86
SMG1-204ENST00000561940 LAMB2P55268 1798 aa3.42□□□□□ -1.86
SMG1-204ENST00000561940 LRRC37A2A6NM11 1700 aa3.41□□□□□ -1.86
SMG1-204ENST00000561940 LRRC37AA6NMS7 1700 aa3.41□□□□□ -1.86
SMG1-204ENST00000561940 COL4A6Q14031 1691 aa3.41□□□□□ -1.86
SMG1-204ENST00000561940 PSMD11O00231 422 aa3.41□□□□□ -1.86
SMG1-204ENST00000561940 GATCO43716 136 aaKnown RBP3.41□□□□□ -1.86
SMG1-204ENST00000561940 ENSAO43768 121 aaKnown RBP3.41□□□□□ -1.86
SMG1-204ENST00000561940 APOA1P02647 267 aa3.41□□□□□ -1.86
SMG1-204ENST00000561940 FUT5Q11128 374 aa3.41□□□□□ -1.86
SMG1-204ENST00000561940 PMVKQ15126 192 aa3.41□□□□□ -1.86
SMG1-204ENST00000561940 CDNFQ49AH0 187 aa3.41□□□□□ -1.86
SMG1-204ENST00000561940 MED27Q6P2C8 311 aa3.41□□□□□ -1.86
SMG1-204ENST00000561940 PRNTQ86SH4 94 aa3.41□□□□□ -1.86
SMG1-204ENST00000561940 PDPNQ86YL7 162 aa3.41□□□□□ -1.86
SMG1-204ENST00000561940 BBS7Q8IWZ6 715 aa3.41□□□□□ -1.86
SMG1-204ENST00000561940 NT5CQ8TCD5 201 aa3.41□□□□□ -1.86
SMG1-204ENST00000561940 GLT1D1Q96MS3 346 aa3.41□□□□□ -1.86
SMG1-204ENST00000561940 TMED9Q9BVK6 235 aa3.41□□□□□ -1.86
SMG1-204ENST00000561940 AGPAT3Q9NRZ7 376 aa3.41□□□□□ -1.86
SMG1-204ENST00000561940 ZSWIM8A7E2V4 1837 aa3.41□□□□□ -1.86
SMG1-204ENST00000561940 DDX60Q8IY21 1712 aaKnown RBP3.41□□□□□ -1.86
SMG1-204ENST00000561940 CEP250Q9BV73 2442 aa3.41□□□□□ -1.86
SMG1-204ENST00000561940 PTPN13Q12923 2485 aa3.41□□□□□ -1.86
SMG1-204ENST00000561940 TMEM72A0PK05 275 aa3.4□□□□□ -1.87
SMG1-204ENST00000561940 XIRP2A4UGR9 3374 aa3.4□□□□□ -1.87
SMG1-204ENST00000561940 LOC730098B7Z3J9 87 aa3.4□□□□□ -1.87
SMG1-204ENST00000561940 SCO1O75880 301 aa3.4□□□□□ -1.87
SMG1-204ENST00000561940 MAS1P04201 325 aa3.4□□□□□ -1.87
SMG1-204ENST00000561940 BGNP21810 368 aa3.4□□□□□ -1.87
SMG1-204ENST00000561940 RGS6P49758 472 aa3.4□□□□□ -1.87
SMG1-204ENST00000561940 TNXAQ16473 311 aa3.4□□□□□ -1.87
SMG1-204ENST00000561940 PRSS54Q6PEW0 395 aa3.4□□□□□ -1.87
SMG1-204ENST00000561940 ST13P4Q8IZP2 240 aaPredicted RBP3.4□□□□□ -1.87
SMG1-204ENST00000561940 SPERTQ8NA61 448 aa3.4□□□□□ -1.87
SMG1-204ENST00000561940 SCRT1Q9BWW7 348 aa3.4□□□□□ -1.87
SMG1-204ENST00000561940 MS4A8Q9BY19 250 aa3.4□□□□□ -1.87
SMG1-204ENST00000561940 SYT4Q9H2B2 425 aa3.4□□□□□ -1.87
SMG1-204ENST00000561940 SLC38A1Q9H2H9 487 aa3.4□□□□□ -1.87
SMG1-204ENST00000561940 BRWD1Q9NSI6 2320 aa3.4□□□□□ -1.87
SMG1-204ENST00000561940 RWDD2AQ9UIY3 292 aa3.4□□□□□ -1.87
SMG1-204ENST00000561940 CNOT1A5YKK6 2376 aaKnown RBP3.4□□□□□ -1.87
SMG1-204ENST00000561940 LTBP2Q14767 1821 aa3.4□□□□□ -1.87
SMG1-204ENST00000561940 REV3LO60673 3130 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 ZFYVE26Q68DK2 2539 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 ANKRD36CQ5JPF3 1778 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 A0A0G2JMP0 313 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 A0A0X1KG70 313 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 ZNF879B4DU55 563 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 RNF113AO15541 343 aaKnown RBP3.39□□□□□ -1.87
SMG1-204ENST00000561940 OR7C2O60412 319 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 CNMDO75829 334 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 LCN1P31025 176 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 PSMB2P49721 201 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 FBXL19-AS1Q494R0 122 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 KPRPQ5T749 579 aaPredicted RBP3.39□□□□□ -1.87
SMG1-204ENST00000561940 OR4K2Q8NGD2 314 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 OR4D6Q8NGJ1 314 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 CDKL2Q92772 493 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 TNFRSF14Q92956 283 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 MRPL48Q96GC5 212 aaKnown RBP3.39□□□□□ -1.87
SMG1-204ENST00000561940 TBL1XR1Q9BZK7 514 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 RAB1BQ9H0U4 201 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 SDHAF2Q9NX18 166 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 RAB22AQ9UL26 194 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 SLC7A11Q9UPY5 501 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 AP3M1Q9Y2T2 418 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 ZNF462Q96JM2 2506 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 CHD9Q3L8U1 2897 aa3.39□□□□□ -1.87
SMG1-204ENST00000561940 SHANK1Q9Y566 2161 aa3.38□□□□□ -1.87
SMG1-204ENST00000561940 IGHV3OR16-8A0A075B7F1 116 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms