RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 PRRX2Q99811 253 aa9.5□□□□□ -0.89
NEIL1-202ENST00000561643 FOXB1Q99853 325 aa9.5□□□□□ -0.89
NEIL1-202ENST00000561643 LIME1Q9H400 295 aa9.5□□□□□ -0.89
NEIL1-202ENST00000561643 FBXL17Q9UF56 701 aa9.5□□□□□ -0.89
NEIL1-202ENST00000561643 FBXO7Q9Y3I1 522 aa9.5□□□□□ -0.89
NEIL1-202ENST00000561643 NTN3O00634 580 aaPredicted RBP9.5□□□□□ -0.89
NEIL1-202ENST00000561643 DEDDO75618 318 aa9.5□□□□□ -0.89
NEIL1-202ENST00000561643 DTYMKP23919 212 aa9.5□□□□□ -0.89
NEIL1-202ENST00000561643 CHATP28329 748 aa9.5□□□□□ -0.89
NEIL1-202ENST00000561643 PSG4Q00888 419 aa9.5□□□□□ -0.89
NEIL1-202ENST00000561643 ZFP36L1Q07352 338 aaKnown RBP9.5□□□□□ -0.89
NEIL1-202ENST00000561643 SLC7A11Q9UPY5 501 aa9.5□□□□□ -0.89
NEIL1-202ENST00000561643 MUC3AQ02505 3323 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 VPS13AQ96RL7 3174 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 OR6C6A6NF89 314 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 ZNF716A6NP11 495 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 PPP1R2P9O14990 202 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 CST4P01036 141 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 RFPL3SP0C7P2 107 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 GLI4P10075 376 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 SPEM2Q0P670 501 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 PHLDA2Q53GA4 152 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 WIPI1Q5MNZ9 446 aaPredicted RBP9.49□□□□□ -0.89
NEIL1-202ENST00000561643 PLCXD3Q63HM9 321 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 SLC22A25Q6T423 547 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 GGNQ86UU5 652 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 C1QL4Q86Z23 238 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 OSR2Q8N2R0 312 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 OR10AD1Q8NGE0 317 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 OR10D3Q8NH80 312 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 RTN4IP1Q8WWV3 396 aaPredicted RBP9.49□□□□□ -0.89
NEIL1-202ENST00000561643 NTNG2Q96CW9 530 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 PARP11Q9NR21 331 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 ST3GAL6Q9Y274 331 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 TP53TG5Q9Y2B4 290 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 WDFY4Q6ZS81 3184 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 CCDC163A0A0D9SF12 145 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 IFNA10P01566 189 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 OR5AC1P0C628 307 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 TMEM33P57088 247 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 PDCD1Q15116 288 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 TSPO2Q5TGU0 170 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 VHLLQ6RSH7 139 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 ZNF610Q8N9Z0 462 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 Q8NFD4 153 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 OR2V1Q8NHB1 315 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 PIGCQ92535 297 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 OR2H1Q9GZK4 316 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 NAA60Q9H7X0 242 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 BCO1Q9HAY6 547 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 DECR2Q9NUI1 292 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 TUBD1Q9UJT1 453 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 SPTBN2O15020 2390 aa9.49□□□□□ -0.89
NEIL1-202ENST00000561643 IGKV1-12A0A0C4DH73 117 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 SEC14L6B5MCN3 397 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 JTBO76095 146 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 IGKV1D-12P01611 117 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 FHITP49789 147 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 ZNF92Q03936 586 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 FGFBP3Q8TAT2 258 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 GOLT1BQ9Y3E0 138 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 CACNA1HO95180 2353 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 ZNF587BE7ETH6 402 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 HIST1H2BKO60814 126 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 HIST1H2BJP06899 126 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 HIST1H2BOP23527 126 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 HIST1H2BBP33778 126 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 HIST1H2BDP58876 126 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 PCBD1P61457 104 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 HIST1H2BCP62807 126 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 HIST2H2BEQ16778 126 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.48□□□□□ -0.89
NEIL1-202ENST00000561643 BATF2Q8N1L9 274 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 HIST3H2BBQ8N257 126 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 CPEB3Q8NE35 698 aaKnown RBP9.48□□□□□ -0.89
NEIL1-202ENST00000561643 OR5L1Q8NGL2 311 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 HIST1H2BHQ93079 126 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 HIST1H2BNQ99877 126 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 HIST1H2BMQ99879 126 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 PARD6GQ9BYG4 376 aaPredicted RBP9.48□□□□□ -0.89
NEIL1-202ENST00000561643 ZNF286AQ9HBT8 521 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 KCNJ16Q9NPI9 418 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 CNOT4O95628 575 aaKnown RBP9.48□□□□□ -0.89
NEIL1-202ENST00000561643 IGHV3-9P01782 118 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 GDF1P27539 372 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 FUT6P51993 359 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 FAM3AP98173 230 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 RHEBQ15382 184 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 TMEM268Q5VZI3 342 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 ZNF442Q9H7R0 627 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 ZNF391Q9UJN7 358 aa9.48□□□□□ -0.89
NEIL1-202ENST00000561643 hCG_38984A0A1B0GV85 526 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 OR5H1A6NKK0 313 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 DIRAS3O95661 229 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 CXCL1P09341 107 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 SNCAP37840 140 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 CEBPGP53567 150 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 RAB4BP61018 213 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 MALLQ13021 153 aa9.47□□□□□ -0.89
NEIL1-202ENST00000561643 TMEM187Q14656 261 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms