RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 FBP1P09467 338 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 ZNF728P0DKX0 622 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 MMP9P14780 707 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 SRMP19623 302 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 MYL9P24844 172 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 NFYBP25208 207 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 PSMA1P25786 263 aaKnown RBP6.56□□□□□ -1.36
LRRC28-219ENST00000560483 CALRP27797 417 aaKnown RBP6.56□□□□□ -1.36
LRRC28-219ENST00000560483 OR3A1P47881 315 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 BPIFB3P59826 476 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 GABARAPL2P60520 117 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 RPS11P62280 158 aaKnown RBP eCLIP6.56□□□□□ -1.36
LRRC28-219ENST00000560483 ACSM1Q08AH1 577 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 ZNF146Q15072 292 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 LTC4SQ16873 150 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 KRTAP24-1Q3LI83 254 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 PLA1AQ53H76 456 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 FAM27D1Q5T7N8 215 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 METAP1DQ6UB28 335 aaPredicted RBP6.56□□□□□ -1.36
LRRC28-219ENST00000560483 C12orf54Q6X4T0 127 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 USP43Q70EL4 1123 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.56□□□□□ -1.36
LRRC28-219ENST00000560483 CHST4Q8NCG5 386 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 OR13D1Q8NGV5 346 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 C8orf46Q8TAG6 207 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 RPS4Y2Q8TD47 263 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 DACT3Q96B18 629 aaPredicted RBP6.56□□□□□ -1.36
LRRC28-219ENST00000560483 BARHL1Q9BZE3 327 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 SELENOIQ9C0D9 397 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 CST11Q9H112 138 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 GAL3ST2Q9H3Q3 398 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 BANF2Q9H503 90 aa6.56□□□□□ -1.36
LRRC28-219ENST00000560483 MBNL3Q9NUK0 354 aaKnown RBP6.56□□□□□ -1.36
LRRC28-219ENST00000560483 TRBV5-7A0A0A0MS05 114 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 A0A0G2JK05 382 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 RNASEK-C17orf49H0YIS7 233 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 SLC33A1O00400 549 aaPredicted RBP6.55□□□□□ -1.36
LRRC28-219ENST00000560483 TOR1AO14656 332 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 GEMIN2O14893 280 aaKnown RBP6.55□□□□□ -1.36
LRRC28-219ENST00000560483 RRP9O43818 475 aaKnown RBP6.55□□□□□ -1.36
LRRC28-219ENST00000560483 ZNF737O75373 536 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 MPIG6BO95866 241 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 FSHBP01225 129 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 CPEP16870 476 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 IGFBP3P17936 291 aaPredicted RBP6.55□□□□□ -1.36
LRRC28-219ENST00000560483 PRTN3P24158 256 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 GLIPR1P48060 266 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 P2RX3P56373 397 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 UBA52P62987 128 aaKnown RBP6.55□□□□□ -1.36
LRRC28-219ENST00000560483 MEF2CQ06413 473 aaPredicted RBP6.55□□□□□ -1.36
LRRC28-219ENST00000560483 RBM39Q14498 530 aaKnown RBP6.55□□□□□ -1.36
LRRC28-219ENST00000560483 IL13RA2Q14627 380 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 IRF3Q14653 427 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 TBCEQ15813 527 aaPredicted RBP6.55□□□□□ -1.36
LRRC28-219ENST00000560483 NEDD8Q15843 81 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 TAF9Q16594 264 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 ASPHD2Q6ICH7 369 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 ZNF529Q6P280 563 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 C17orf107Q6ZR85 190 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 PHC2Q8IXK0 858 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 Q8N7P7 452 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 ZNF565Q8N9K5 539 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 OR4D6Q8NGJ1 314 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 OR51T1Q8NGJ9 327 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 NDNFQ8TB73 568 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 CCDC107Q8WV48 283 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 FOXRED1Q96CU9 486 aaPredicted RBP6.55□□□□□ -1.36
LRRC28-219ENST00000560483 ZNF48Q96MX3 618 aaPredicted RBP6.55□□□□□ -1.36
LRRC28-219ENST00000560483 DPCDQ9BVM2 203 aaPredicted RBP6.55□□□□□ -1.36
LRRC28-219ENST00000560483 VCX3AQ9NNX9 186 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 ACOT13Q9NPJ3 140 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 ABCB10Q9NRK6 738 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 LSM2Q9Y333 95 aaKnown RBP6.55□□□□□ -1.36
LRRC28-219ENST00000560483 AK6Q9Y3D8 172 aaKnown RBP6.55□□□□□ -1.36
LRRC28-219ENST00000560483 LINC00312Q9Y6C7 94 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 ATRQ13535 2644 aa6.55□□□□□ -1.36
LRRC28-219ENST00000560483 A0A1W2PP11 408 aa6.54□□□□□ -1.36
LRRC28-219ENST00000560483 ODAMA1E959 279 aa6.54□□□□□ -1.36
LRRC28-219ENST00000560483 MCRIP1C9JLW8 97 aa6.54□□□□□ -1.36
LRRC28-219ENST00000560483 CCRL2O00421 344 aa6.54□□□□□ -1.36
LRRC28-219ENST00000560483 PDCD5O14737 125 aa6.54□□□□□ -1.36
LRRC28-219ENST00000560483 PIN1P1O15428 100 aa6.54□□□□□ -1.36
LRRC28-219ENST00000560483 CLPXO76031 633 aa6.54□□□□□ -1.36
LRRC28-219ENST00000560483 MGMTP16455 207 aa6.54□□□□□ -1.36
LRRC28-219ENST00000560483 OMGP23515 440 aa6.54□□□□□ -1.36
LRRC28-219ENST00000560483 HTR2CP28335 458 aa6.54□□□□□ -1.36
LRRC28-219ENST00000560483 GABRA5P31644 462 aa6.54□□□□□ -1.36
LRRC28-219ENST00000560483 SAA4P35542 130 aa6.54□□□□□ -1.36
LRRC28-219ENST00000560483 UBE2E1P51965 193 aa6.54□□□□□ -1.36
LRRC28-219ENST00000560483 RBM11P57052 281 aaKnown RBP6.54□□□□□ -1.36
LRRC28-219ENST00000560483 EMX1Q04741 257 aaPredicted RBP6.54□□□□□ -1.36
LRRC28-219ENST00000560483 TPBGQ13641 420 aa6.54□□□□□ -1.36
LRRC28-219ENST00000560483 P2RY14Q15391 338 aa6.54□□□□□ -1.36
LRRC28-219ENST00000560483 SLC9A3R2Q15599 337 aa6.54□□□□□ -1.36
LRRC28-219ENST00000560483 FAM189A2Q15884 450 aa6.54□□□□□ -1.36
LRRC28-219ENST00000560483 RAB11BQ15907 218 aa6.54□□□□□ -1.36
LRRC28-219ENST00000560483 PRAMEF5Q5TYX0 476 aa6.54□□□□□ -1.36
LRRC28-219ENST00000560483 ELP2Q6IA86 826 aa6.54□□□□□ -1.36
LRRC28-219ENST00000560483 Q6P435 159 aa6.54□□□□□ -1.36
LRRC28-219ENST00000560483 C1orf122Q6ZSJ8 110 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms