RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 UBAC2Q8NBM4 344 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 BHLHE23Q8NDY6 225 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 C1orf162Q8NEQ5 155 aaPredicted RBP6.92□□□□□ -1.3
SMAD3-212ENST00000559937 OR4A4PQ8NGN8 299 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 GLYATL2Q8WU03 294 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 IL22RA2Q969J5 263 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 SMIM8Q96KF7 97 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 MICU1Q9BPX6 476 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 CABLES2Q9BTV7 478 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 RTL8AQ9BWD3 113 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 C1QTNF6Q9BXI9 259 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 TMEM222Q9H0R3 208 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 ARV1Q9H2C2 271 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 CDH20Q9HBT6 801 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 ASCL3Q9NQ33 180 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 TREM2Q9NZC2 230 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 CRIM1Q9NZV1 1036 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 LPAR3Q9UBY5 353 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 PCDHB10Q9UN67 800 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 AMDHD2Q9Y303 409 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 POMT1Q9Y6A1 747 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 USP24Q9UPU5 2620 aa6.92□□□□□ -1.3
SMAD3-212ENST00000559937 FRYQ5TBA9 3013 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 CFAP47Q6ZTR5 3102 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 BORCS7-ASMTA0A0B4J1R7 106 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 TRAV17A0A0B4J275 112 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 C3orf85A0A1B0GTC6 90 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 FAM221AA4D161 298 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 CLEC18AA5D8T8 446 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 LGALS8O00214 317 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 DEGS1O15121 323 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 SYNGR1O43759 233 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 MBPP02686 304 aaPredicted RBP6.91□□□□□ -1.3
SMAD3-212ENST00000559937 FTH1P19P0C7X4 201 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 CCL2P13500 99 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 MMP9P14780 707 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 RAC2P15153 192 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 PRKACAP17612 351 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 S100GP29377 79 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 HLA-DRB3P79483 266 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 TAGLNQ01995 201 aaKnown RBP6.91□□□□□ -1.3
SMAD3-212ENST00000559937 PJVKQ0ZLH3 352 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 ZNF169Q14929 603 aaPredicted RBP6.91□□□□□ -1.3
SMAD3-212ENST00000559937 HIKESHIQ53FT3 197 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 PHLDA2Q53GA4 152 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 BRICD5Q6PL45 260 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 ZNF565Q8N9K5 539 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 SPERTQ8NA61 448 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 CLEC18CQ8NCF0 446 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 OR5T2Q8NGG2 359 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 OR4D5Q8NGN0 318 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 MRPL30Q8TCC3 161 aaKnown RBP6.91□□□□□ -1.3
SMAD3-212ENST00000559937 NEK7Q8TDX7 302 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 TMED6Q8WW62 240 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 TMEM56Q96MV1 263 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 OR51I2Q9H344 312 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 C12orf49Q9H741 205 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 TAF9BQ9HBM6 251 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 ZC4H2Q9NQZ6 224 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 ASF1BQ9NVP2 202 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 FBXL17Q9UF56 701 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 POLDIP2Q9Y2S7 368 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 LSM5Q9Y4Y9 91 aaKnown RBP6.91□□□□□ -1.3
SMAD3-212ENST00000559937 TMEM56-RWDD3S4R434 201 aa6.91□□□□□ -1.3
SMAD3-212ENST00000559937 TMEM218A2RU14 115 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 TMEM210A6NLX4 147 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 IQCF6A8MYZ5 107 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 TM4SF5O14894 197 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 ST8SIA3O43173 380 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 PHF1O43189 567 aaPredicted RBP6.9□□□□□ -1.3
SMAD3-212ENST00000559937 SMPD2O60906 423 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 SEC11BP0C7V7 166 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 CBR1P16152 277 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 UCP1P25874 307 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 GNRHRP30968 328 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 UBE2NP61088 152 aaKnown RBP6.9□□□□□ -1.3
SMAD3-212ENST00000559937 PPP1CBP62140 327 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 PDCD1Q15116 288 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 MST1LQ2TV78 715 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 IGSF11Q5DX21 431 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 FAM76BQ5HYJ3 339 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 C10orf91Q5T1B1 145 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 ATP1A1-AS1Q5TC04 95 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 RPL7L1Q6DKI1 246 aaKnown RBP6.9□□□□□ -1.3
SMAD3-212ENST00000559937 OR2A2Q6IF42 318 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 HAGHLQ6PII5 290 aaPredicted RBP6.9□□□□□ -1.3
SMAD3-212ENST00000559937 Q6ZT83 130 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 FAM214BQ7L5A3 538 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 LYZL2Q7Z4W2 148 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 C1orf174Q8IYL3 243 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 SPAG16Q8N0X2 631 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 GAPTQ8N292 157 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 COMMD1Q8N668 190 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 SUMF2Q8NBJ7 301 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 NAXEQ8NCW5 288 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 BPIFCQ8NFQ6 507 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 LHFPL5Q8TAF8 219 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 WNT2BQ93097 391 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 SARAFQ96BY9 339 aa6.9□□□□□ -1.3
SMAD3-212ENST00000559937 C11orf1Q9H5F2 150 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms