RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 ELK4P28324 431 aa0.94□□□□□ -2.26
CASC4-210ENST00000559550 BLVRBP30043 206 aaPredicted RBP0.94□□□□□ -2.26
CASC4-210ENST00000559550 GUSBP1Q15486 140 aa0.94□□□□□ -2.26
CASC4-210ENST00000559550 TMEM176BQ3YBM2 270 aaPredicted RBP0.94□□□□□ -2.26
CASC4-210ENST00000559550 ZCWPW2Q504Y3 356 aa0.94□□□□□ -2.26
CASC4-210ENST00000559550 SPIN4Q56A73 249 aa0.94□□□□□ -2.26
CASC4-210ENST00000559550 ZNF767PQ75MW2 155 aa0.94□□□□□ -2.26
CASC4-210ENST00000559550 FER1L6-AS1Q8NA97 138 aa0.94□□□□□ -2.26
CASC4-210ENST00000559550 OR51Q1Q8NH59 317 aa0.94□□□□□ -2.26
CASC4-210ENST00000559550 HIST1H2BAQ96A08 127 aa0.94□□□□□ -2.26
CASC4-210ENST00000559550 FAM131CQ96AQ9 280 aa0.94□□□□□ -2.26
CASC4-210ENST00000559550 REEP6Q96HR9 211 aa0.94□□□□□ -2.26
CASC4-210ENST00000559550 CPB2Q96IY4 423 aa0.94□□□□□ -2.26
CASC4-210ENST00000559550 MAP1LC3CQ9BXW4 147 aa0.94□□□□□ -2.26
CASC4-210ENST00000559550 AICDAQ9GZX7 198 aa0.94□□□□□ -2.26
CASC4-210ENST00000559550 SLC25A31Q9H0C2 315 aa0.94□□□□□ -2.26
CASC4-210ENST00000559550 MFSD1Q9H3U5 465 aa0.94□□□□□ -2.26
CASC4-210ENST00000559550 DNAJC27Q9NZQ0 273 aa0.94□□□□□ -2.26
CASC4-210ENST00000559550 VPREB3Q9UKI3 123 aa0.94□□□□□ -2.26
CASC4-210ENST00000559550 TRAV8-3A0A0A6YYJ7 113 aa0.93□□□□□ -2.26
CASC4-210ENST00000559550 PGPA6NDG6 321 aa0.93□□□□□ -2.26
CASC4-210ENST00000559550 KNCNA6PVL3 124 aa0.93□□□□□ -2.26
CASC4-210ENST00000559550 ODF3BA8MYP8 253 aa0.93□□□□□ -2.26
CASC4-210ENST00000559550 LY6LH3BQJ8 138 aa0.93□□□□□ -2.26
CASC4-210ENST00000559550 EEF1E1O43324 174 aaKnown RBP0.93□□□□□ -2.26
CASC4-210ENST00000559550 TCF21O43680 179 aa0.93□□□□□ -2.26
CASC4-210ENST00000559550 SFTPCP11686 197 aa0.93□□□□□ -2.26
CASC4-210ENST00000559550 ARR3P36575 388 aa0.93□□□□□ -2.26
CASC4-210ENST00000559550 PLTPP55058 493 aa0.93□□□□□ -2.26
CASC4-210ENST00000559550 SS18Q15532 418 aa0.93□□□□□ -2.26
CASC4-210ENST00000559550 CEACAM21Q3KPI0 293 aa0.93□□□□□ -2.26
CASC4-210ENST00000559550 TMEM25Q86YD3 366 aa0.93□□□□□ -2.26
CASC4-210ENST00000559550 ZIC4Q8N9L1 334 aa0.93□□□□□ -2.26
CASC4-210ENST00000559550 DRAXINQ8NBI3 349 aaPredicted RBP0.93□□□□□ -2.26
CASC4-210ENST00000559550 OR10P1Q8NGE3 313 aa0.93□□□□□ -2.26
CASC4-210ENST00000559550 CACNG8Q8WXS5 425 aa0.93□□□□□ -2.26
CASC4-210ENST00000559550 VAT1Q99536 393 aa0.93□□□□□ -2.26
CASC4-210ENST00000559550 CRLF2Q9HC73 371 aa0.93□□□□□ -2.26
CASC4-210ENST00000559550 ANKHQ9HCJ1 492 aa0.93□□□□□ -2.26
CASC4-210ENST00000559550 RPRD1BQ9NQG5 326 aaKnown RBP0.93□□□□□ -2.26
CASC4-210ENST00000559550 BTRCQ9Y297 605 aa0.93□□□□□ -2.26
CASC4-210ENST00000559550 AMMECR1Q9Y4X0 333 aaPredicted RBP0.93□□□□□ -2.26
CASC4-210ENST00000559550 LCTP09848 1927 aa0.93□□□□□ -2.26
CASC4-210ENST00000559550 AQRO60306 1485 aaKnown RBP eCLIP0.92□□□□□ -2.26
CASC4-210ENST00000559550 PLXNA3P51805 1871 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 ATG2BQ96BY7 2078 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 PRMT5O14744 637 aaPredicted RBP0.92□□□□□ -2.26
CASC4-210ENST00000559550 KDELR3O43731 214 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 ENSAO43768 121 aaKnown RBP0.92□□□□□ -2.26
CASC4-210ENST00000559550 HMMRO75330 724 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 SOX14O95416 240 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 MBP02144 154 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 GYPCP04921 128 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 TPM2P07951 284 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 PRKACAP17612 351 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 GCLMP48507 274 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 ATP5J2P56134 94 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 RAB25P57735 213 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 APOFQ13790 326 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 MMDQ15546 238 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 GOLGA7BQ2TAP0 167 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 KRTCAP2Q8N6L1 136 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 DOK4Q8TEW6 326 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 KCTD4Q8WVF5 259 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 ZNF396Q96N95 335 aaPredicted RBP0.92□□□□□ -2.26
CASC4-210ENST00000559550 BIRC8Q96P09 236 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 ALX4Q9H161 411 aaPredicted RBP0.92□□□□□ -2.26
CASC4-210ENST00000559550 CXCL16Q9H2A7 254 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 KCNIP2Q9NS61 270 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 SDHAF2Q9NX18 166 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 TAS2R9Q9NYW1 312 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 GBF1Q92538 1859 aa0.92□□□□□ -2.26
CASC4-210ENST00000559550 STRCP1A6NGW2 1772 aa0.91□□□□□ -2.26
CASC4-210ENST00000559550 OTOFQ9HC10 1997 aa0.91□□□□□ -2.26
CASC4-210ENST00000559550 IGHV2-26A0A0B4J1V2 119 aa0.91□□□□□ -2.26
CASC4-210ENST00000559550 LOC102725191A0A1B0GVB3 256 aa0.91□□□□□ -2.26
CASC4-210ENST00000559550 C19orf71A6NCJ1 209 aa0.91□□□□□ -2.26
CASC4-210ENST00000559550 ZNF860A6NHJ4 632 aa0.91□□□□□ -2.26
CASC4-210ENST00000559550 RFXANKO14593 260 aa0.91□□□□□ -2.26
CASC4-210ENST00000559550 SLC25A20O43772 301 aa0.91□□□□□ -2.26
CASC4-210ENST00000559550 SNAI1O95863 264 aaPredicted RBP0.91□□□□□ -2.26
CASC4-210ENST00000559550 CA2P00918 260 aa0.91□□□□□ -2.26
CASC4-210ENST00000559550 STX4Q12846 297 aa0.91□□□□□ -2.26
CASC4-210ENST00000559550 CLEC20AQ6ZU45 233 aa0.91□□□□□ -2.26
CASC4-210ENST00000559550 NIT1Q86X76 327 aa0.91□□□□□ -2.26
CASC4-210ENST00000559550 RBM45Q8IUH3 476 aaKnown RBP0.91□□□□□ -2.26
CASC4-210ENST00000559550 DDIT4LQ96D03 193 aa0.91□□□□□ -2.26
CASC4-210ENST00000559550 ZNF625Q96I27 306 aaPredicted RBP0.91□□□□□ -2.26
CASC4-210ENST00000559550 ZNF251Q9BRH9 671 aa0.91□□□□□ -2.26
CASC4-210ENST00000559550 COL4A2P08572 1712 aa0.91□□□□□ -2.26
CASC4-210ENST00000559550 COL18A1P39060 1754 aa0.91□□□□□ -2.26
CASC4-210ENST00000559550 CRB1P82279 1406 aa0.9□□□□□ -2.26
CASC4-210ENST00000559550 MPDZO75970 2070 aa0.9□□□□□ -2.26
CASC4-210ENST00000559550 FLG2Q5D862 2391 aaPredicted RBP0.9□□□□□ -2.27
CASC4-210ENST00000559550 IGSF23A1L1A6 192 aa0.9□□□□□ -2.27
CASC4-210ENST00000559550 H3BRN7 92 aa0.9□□□□□ -2.27
CASC4-210ENST00000559550 SPOPO43791 374 aa0.9□□□□□ -2.27
CASC4-210ENST00000559550 PDCD6O75340 191 aa0.9□□□□□ -2.27
CASC4-210ENST00000559550 RAB36O95755 333 aa0.9□□□□□ -2.27
CASC4-210ENST00000559550 CRABP1P29762 137 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms