RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 F2RL1P55085 397 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 CLDN17P56750 224 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 RAP1BP61224 184 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 RAP1AP62834 184 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 GLO1Q04760 184 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 RPL18Q07020 188 aaKnown RBP4.99□□□□□ -1.61
USP3-212ENST00000559276 PEA15Q15121 130 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 SURF2Q15527 256 aaPredicted RBP4.99□□□□□ -1.61
USP3-212ENST00000559276 PCK2Q16822 640 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 C21orf62-AS1Q17RA5 79 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 CEACAM16Q2WEN9 425 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 GFOD2Q3B7J2 385 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 MS4A18Q3C1V0 323 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 MESTQ5EB52 335 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 GLYATL3Q5SZD4 288 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 PRSS54Q6PEW0 395 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 VHLLQ6RSH7 139 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 KLHL24Q6TFL4 600 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 RHOUQ7L0Q8 258 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 ZNF627Q7L945 461 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 DPY19L4Q7Z388 723 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 HOGA1Q86XE5 327 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 CATSPERDQ86XM0 798 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 ANGPTL5Q86XS5 388 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 LYPD6Q86Y78 171 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 THNSL2Q86YJ6 484 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 C10orf53Q8N6V4 93 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 ZNF511Q8NB15 262 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 MFSD8Q8NHS3 518 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 NUDCD2Q8WVJ2 157 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 ZNRF4Q8WWF5 429 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 TAAR8Q969N4 342 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 NRIP2Q9BQI9 281 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 TINAGL1Q9GZM7 467 aaPredicted RBP4.99□□□□□ -1.61
USP3-212ENST00000559276 CHST6Q9GZX3 395 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 SYT4Q9H2B2 425 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 SMDT1Q9H4I9 107 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 ZNF442Q9H7R0 627 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 MOB1AQ9H8S9 216 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 PARP11Q9NR21 331 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 UQCC1Q9NVA1 299 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 RCC2Q9P258 522 aaKnown RBP4.99□□□□□ -1.61
USP3-212ENST00000559276 METTL1Q9UBP6 276 aaKnown RBP4.99□□□□□ -1.61
USP3-212ENST00000559276 R4GMQ9 66 aa4.99□□□□□ -1.61
USP3-212ENST00000559276 IGLV1-36A0A0B4J1U3 117 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 LOC102725191A0A1B0GVB3 256 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 PRSS37A4D1T9 235 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 C1orf196B1AJZ1 125 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 C3orf80F5H4A9 247 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 UBE2CO00762 179 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 GATCO43716 136 aaKnown RBP4.98□□□□□ -1.61
USP3-212ENST00000559276 OR2T1O43869 369 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 CA11O75493 328 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 JTBO76095 146 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 OR6A2O95222 327 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 HLA-HP01893 362 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 MT-ND4LP03901 98 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 CD5P06127 495 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 PTHLHP12272 177 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 ZNF14P17017 642 aaPredicted RBP4.98□□□□□ -1.61
USP3-212ENST00000559276 ADCYAP1P18509 176 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 COL8A2P25067 703 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 GRPRP30550 384 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 RPL35P42766 123 aaKnown RBP4.98□□□□□ -1.61
USP3-212ENST00000559276 MMP16P51512 607 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 DVL1P1P54792 670 aaPredicted RBP4.98□□□□□ -1.61
USP3-212ENST00000559276 TAS2R46P59540 309 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 UBE2NP61088 152 aaKnown RBP4.98□□□□□ -1.61
USP3-212ENST00000559276 RPL27P61353 136 aaKnown RBP4.98□□□□□ -1.61
USP3-212ENST00000559276 ECH1Q13011 328 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 PDZK1IP1Q13113 114 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 PPP1R1AQ13522 171 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 MEP1BQ16820 701 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 ZNF260Q3ZCT1 412 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 SCGB2B2Q4G0G5 96 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 TM4SF20Q53R12 229 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 FAM74A1Q5RGS3 127 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 C1orf229Q6ZS94 237 aaPredicted RBP4.98□□□□□ -1.61
USP3-212ENST00000559276 ABHD12BQ7Z5M8 362 aaPredicted RBP4.98□□□□□ -1.61
USP3-212ENST00000559276 MDP1Q86V88 176 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 LRP11Q86VZ4 500 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 C20orf196Q8IYI0 205 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 SLC22A24Q8N4F4 322 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 ZNF561Q8N587 486 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.98□□□□□ -1.61
USP3-212ENST00000559276 SEMA6DQ8NFY4 1073 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 OR8S1Q8NH09 359 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 LYPD6BQ8NI32 183 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 ZNF519Q8TB69 540 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 DCUN1D4Q92564 292 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 SLC25A36Q96CQ1 311 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 MALSU1Q96EH3 234 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 SLC25A44Q96H78 314 aaPredicted RBP4.98□□□□□ -1.61
USP3-212ENST00000559276 OXGR1Q96P68 337 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 TSPAN32Q96QS1 320 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 SLC6A7Q99884 636 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 MRPL37Q9BZE1 423 aaKnown RBP4.98□□□□□ -1.61
USP3-212ENST00000559276 CST11Q9H112 138 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 WDR13Q9H1Z4 485 aa4.98□□□□□ -1.61
USP3-212ENST00000559276 TXNIPQ9H3M7 391 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms