RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 SPICQ8N5J4 248 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 MUC7Q8TAX7 377 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 C22orf15Q8WYQ4 148 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 YPEL4Q96NS1 127 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 SRRQ9GZT4 340 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 DSN1Q9H410 356 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 VSIRQ9H7M9 311 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 IFT46Q9NQC8 304 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 NRBP2Q9NSY0 501 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 MS4A12Q9NXJ0 267 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 MAT2BQ9NZL9 334 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 C15orf41Q9Y2V0 281 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 NOSIPQ9Y314 301 aaKnown RBP1.27□□□□□ -2.21
VPS13C-207ENST00000558919 FADS3Q9Y5Q0 445 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 BAHCC1Q9P281 2608 aa1.27□□□□□ -2.21
VPS13C-207ENST00000558919 BAZ1BQ9UIG0 1483 aaKnown RBP1.26□□□□□ -2.21
VPS13C-207ENST00000558919 USP42Q9H9J4 1324 aaKnown RBP1.26□□□□□ -2.21
VPS13C-207ENST00000558919 A0A1B0GTI1 187 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 SDHAF1A6NFY7 115 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 F8VZ95 297 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 TOR1AO14656 332 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 FFAR1O14842 300 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 RGS5O15539 181 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 SGCEO43556 437 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 SCN2BO60939 215 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 NDUFS6O75380 124 aaKnown RBP1.26□□□□□ -2.21
VPS13C-207ENST00000558919 SNAP29O95721 258 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 OCMP0CE72 109 aaPredicted RBP1.26□□□□□ -2.21
VPS13C-207ENST00000558919 SLC35E2BP0CK96 405 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 ELK4P28324 431 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 KDELR2P33947 212 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 RPA3P35244 121 aaPredicted RBP1.26□□□□□ -2.21
VPS13C-207ENST00000558919 MAGEA3P43357 314 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 MAGEA6P43360 314 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 CCL23P55773 120 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 KLF3P57682 345 aaPredicted RBP1.26□□□□□ -2.21
VPS13C-207ENST00000558919 TPBGQ13641 420 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 ENDOGQ14249 297 aaKnown RBP1.26□□□□□ -2.21
VPS13C-207ENST00000558919 TRIP13Q15645 432 aaPredicted RBP1.26□□□□□ -2.21
VPS13C-207ENST00000558919 BSXQ3C1V8 233 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 PDZD11Q5EBL8 140 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 UBE2NLQ5JXB2 153 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 LDLRAD2Q5SZI1 272 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 TMEM215Q68D42 235 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 GLYATQ6IB77 296 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 TPGS1Q6ZTW0 290 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 SSX7Q7RTT5 188 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 TMEM144Q7Z5S9 345 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 CRLF3Q8IUI8 442 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 CD302Q8IX05 232 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 FAM9CQ8IZT9 166 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 RPRMLQ8N4K4 120 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 ATP6V1C2Q8NEY4 427 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 OR7G1Q8NGA0 311 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 OR4K17Q8NGC6 315 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 OR2Y1Q8NGV0 311 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 SUN5Q8TC36 379 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 BLNKQ8WV28 456 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 NELFBQ8WX92 580 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 CCL17Q92583 94 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 BIRC8Q96P09 236 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 LLPHQ9BRT6 129 aaKnown RBP1.26□□□□□ -2.21
VPS13C-207ENST00000558919 HDHD2Q9H0R4 259 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 METTL8Q9H825 291 aaKnown RBP1.26□□□□□ -2.21
VPS13C-207ENST00000558919 DIABLOQ9NR28 239 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 CYB5R1Q9UHQ9 305 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 SLC22A14Q9Y267 594 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 URGCP-MRPS24S4R325 110 aa1.26□□□□□ -2.21
VPS13C-207ENST00000558919 ABCB11O95342 1321 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 IGHV3-43A0A0B4J1X8 118 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 C1orf232A0A0U1RR37 186 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 A0A1B0GXF2 115 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 MYBPHLA2RUH7 354 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 PGPA6NDG6 321 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 RBFOX3A6NFN3 312 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 MKRN2OSH3BPM6 223 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 SMLR1H3BR10 107 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 GOLGA8RI6L899 631 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 M0QXV9 152 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 UBDO15205 165 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 FABP7O15540 132 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 CRXO43186 299 aaPredicted RBP1.25□□□□□ -2.21
VPS13C-207ENST00000558919 SYNGR2O43760 224 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 SHOX2O60902 331 aaPredicted RBP1.25□□□□□ -2.21
VPS13C-207ENST00000558919 MYO1DO94832 1006 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 PET100P0DJ07 73 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 RD3LP0DJH9 198 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 PRTN3P24158 256 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 PSMB9P28065 219 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 CD40LGP29965 261 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 GTF2H1P32780 548 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 LGALS7P47929 136 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 GCLMP48507 274 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 FOXA1P55317 472 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 FMODQ06828 376 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 BAXQ07812 192 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 SLAMF1Q13291 335 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 TTMPQ5BVD1 217 aa1.25□□□□□ -2.21
VPS13C-207ENST00000558919 RBM48Q5RL73 367 aaKnown RBP1.25□□□□□ -2.21
VPS13C-207ENST00000558919 PLEKHG7Q6ZR37 379 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms