RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 GABRA5P31644 462 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 MAP2K4P45985 399 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 PSMD7P51665 324 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 UBA52P62987 128 aaKnown RBP6.83□□□□□ -1.32
PSEN1-223ENST00000557511 DYNC1I2Q13409 638 aaKnown RBP6.83□□□□□ -1.32
PSEN1-223ENST00000557511 RBM39Q14498 530 aaKnown RBP6.83□□□□□ -1.32
PSEN1-223ENST00000557511 MPV17LQ2QL34 196 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 DEFB112Q30KQ8 113 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 KRTAP24-1Q3LI83 254 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 MIDNQ504T8 468 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 C12orf54Q6X4T0 127 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 ASCL4Q6XD76 172 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 C17orf107Q6ZR85 190 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 Q8N7P7 452 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 ZNF565Q8N9K5 539 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 OR4S1Q8NGB4 309 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 OR4D6Q8NGJ1 314 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 OR51T1Q8NGJ9 327 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 SPATA3Q8NHX4 192 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 FAM216AQ8WUB2 273 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 SSMEM1Q8WWF3 244 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 SGCDQ92629 289 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 ORAI1Q96D31 301 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 UNKLQ9H9P5 680 aaKnown RBP6.83□□□□□ -1.32
PSEN1-223ENST00000557511 PLGRKTQ9HBL7 147 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 VCX3AQ9NNX9 186 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 RAB9BQ9NP90 201 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 TAS2R3Q9NYW6 316 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 LSM2Q9Y333 95 aaKnown RBP6.83□□□□□ -1.32
PSEN1-223ENST00000557511 UBE2J1Q9Y385 318 aaPredicted RBP6.83□□□□□ -1.32
PSEN1-223ENST00000557511 LRRC42Q9Y546 428 aa6.83□□□□□ -1.32
PSEN1-223ENST00000557511 ANK3Q12955 4377 aaKnown RBP6.83□□□□□ -1.32
PSEN1-223ENST00000557511 MEIKINA0A087WXM9 373 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 DNAJC9-AS1A6NH13 148 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 MCRIP1C9JLW8 97 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 RNASEK-C17orf49H0YIS7 233 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 SLC33A1O00400 549 aaPredicted RBP6.82□□□□□ -1.32
PSEN1-223ENST00000557511 HOXA3O43365 443 aaPredicted RBP6.82□□□□□ -1.32
PSEN1-223ENST00000557511 PSPNO60542 156 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 FCN3O75636 299 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 CSN2P05814 226 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 LMO1P25800 156 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 PSMB9P28065 219 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 OR3A1P47881 315 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 ARHGDIBP52566 201 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 RBM11P57052 281 aaKnown RBP6.82□□□□□ -1.32
PSEN1-223ENST00000557511 SRSF2Q01130 221 aaKnown RBP6.82□□□□□ -1.32
PSEN1-223ENST00000557511 TAGLNQ01995 201 aaKnown RBP6.82□□□□□ -1.32
PSEN1-223ENST00000557511 AESQ08117 197 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 KLRD1Q13241 179 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 ZNF273Q14593 569 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 ATXN7L3Q14CW9 347 aaPredicted RBP6.82□□□□□ -1.32
PSEN1-223ENST00000557511 PIGYQ3MUY2 71 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 NHLRC3Q5JS37 347 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 UNQ9370/PRO34162Q6UXP9 181 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 Q6YL49 198 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 ZNF782Q6ZMW2 699 aaPredicted RBP6.82□□□□□ -1.32
PSEN1-223ENST00000557511 PHC2Q8IXK0 858 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 PNKDQ8N490 385 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 TMEM86BQ8N661 226 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 TPRX1Q8N7U7 411 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 TNFRSF19Q9NS68 423 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 POMT1Q9Y6A1 747 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 SESN1Q9Y6P5 492 aa6.82□□□□□ -1.32
PSEN1-223ENST00000557511 A0A0U1RQK1 487 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 TMEM30CPA0ZSE6 113 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 ODAMA1E959 279 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 FAM90A10PA6NDY2 464 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 FAM90A18PA6NE21 464 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 FAM90A16PA6NEW6 464 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 FAM90A20PA6NIJ5 464 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 FAM90A8PA6NJQ4 464 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 FAM90A7PA6NKC0 464 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 ZNF729A6NN14 1252 aaPredicted RBP6.81□□□□□ -1.32
PSEN1-223ENST00000557511 C17orf98A8MV24 154 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 FAM90A22PA8MWA6 464 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 FAM90A12PA8MX19 464 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 FAM90A5PA8MXJ8 464 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 FAM90A23PA8MXZ1 464 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 CLDN34H7C241 214 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 CCRL2O00421 344 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 TOR1AO14656 332 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 GEMIN2O14893 280 aaKnown RBP6.81□□□□□ -1.32
PSEN1-223ENST00000557511 PIN1P1O15428 100 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 CLPXO76031 633 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 BPNT1O95861 308 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 ARG1P05089 322 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 RNASE1P07998 156 aaKnown RBP6.81□□□□□ -1.32
PSEN1-223ENST00000557511 MELTFP08582 738 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 UCHL1P09936 223 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 FAM90A15PP0C7V4 464 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 FAM90A13PP0C7W8 464 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 FAM90A14PP0C7W9 464 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 FAM90A24PP0C7X0 464 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 IGHV1-8P0DP01 117 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 MGMTP16455 207 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 CALRP27797 417 aaKnown RBP6.81□□□□□ -1.32
PSEN1-223ENST00000557511 HTR2CP28335 458 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 SAA4P35542 130 aa6.81□□□□□ -1.32
PSEN1-223ENST00000557511 GLP1RP43220 463 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms