RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 FAM199XQ6PEV8 388 aaPredicted RBP2.31□□□□□ -2.04
VRK1-207ENST00000557352 CBLN3Q6UW01 205 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 ISLR2Q6UXK2 745 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 DNM1P46Q6ZS02 220 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 OLIG3Q7RTU3 272 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 FAM122BQ7Z309 247 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 HDDC2Q7Z4H3 204 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 OAFQ86UD1 273 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 PPP1R27Q86WC6 154 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 RPS19BP1Q86WX3 136 aaKnown RBP2.31□□□□□ -2.04
VRK1-207ENST00000557352 PLCZ1Q86YW0 608 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 GCNT2Q8N0V5 402 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 GTPBP8Q8N3Z3 284 aaPredicted RBP2.31□□□□□ -2.04
VRK1-207ENST00000557352 TMEM156Q8N614 296 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 LRRC75AQ8NAA5 344 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 DEFB124Q8NES8 71 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 PROKR2Q8NFJ6 384 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 OR2M3Q8NG83 312 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 OR10G3Q8NGC4 313 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 OR8D4Q8NGM9 314 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 OR5J2Q8NH18 312 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 MFSD8Q8NHS3 518 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 CNIH3Q8TBE1 160 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 FANK1Q8TC84 345 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 RAB2BQ8WUD1 216 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 PSMF1Q92530 271 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 KIAA1143Q96AT1 154 aaPredicted RBP2.31□□□□□ -2.04
VRK1-207ENST00000557352 C8orf44Q96CB5 159 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 DDIT4LQ96D03 193 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 SGTBQ96EQ0 304 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 AKR1E2Q96JD6 320 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 GPA33Q99795 319 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 COPS4Q9BT78 406 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 PLA2G12AQ9BZM1 189 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 OR52D1Q9H346 318 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 RIBC2Q9H4K1 309 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 GPN2Q9H9Y4 310 aaPredicted RBP2.31□□□□□ -2.04
VRK1-207ENST00000557352 SIAEQ9HAT2 523 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 PROK2Q9HC23 129 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 MCCC2Q9HCC0 563 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 FGF20Q9NP95 211 aaPredicted RBP2.31□□□□□ -2.04
VRK1-207ENST00000557352 ACOT13Q9NPJ3 140 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 NANSQ9NR45 359 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 PAK1IP1Q9NWT1 392 aaPredicted RBP2.31□□□□□ -2.04
VRK1-207ENST00000557352 HPF1Q9NWY4 346 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 MRPL39Q9NYK5 338 aaKnown RBP2.31□□□□□ -2.04
VRK1-207ENST00000557352 ZNF226Q9NYT6 803 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 ONECUT1Q9UBC0 465 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 PSG11Q9UQ72 335 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 TRAPPC4Q9Y296 219 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 LSM2Q9Y333 95 aaKnown RBP2.31□□□□□ -2.04
VRK1-207ENST00000557352 HDGFL3Q9Y3E1 203 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 ICE1Q9Y2F5 2266 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 ZFHX4Q86UP3 3567 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 DSPP15924 2871 aaKnown RBP2.31□□□□□ -2.04
VRK1-207ENST00000557352 BOD1L1Q8NFC6 3051 aa2.31□□□□□ -2.04
VRK1-207ENST00000557352 CACNA1DQ01668 2161 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 HIVEP2P31629 2446 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 ACACBO00763 2458 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 TMED7-TICAM2A0A0A6YYA0 188 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 A6NIZ1 184 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 ZSCAN5BA6NJL1 495 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 OR6C65A6NJZ3 312 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 FAM74A7A6NL05 159 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 RIIAD1A6NNX1 92 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 ZNF99A8MXY4 864 aaPredicted RBP2.3□□□□□ -2.04
VRK1-207ENST00000557352 SLC22A1O15245 554 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 PRKYO43930 277 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 EIF1BO60739 113 aaKnown RBP2.3□□□□□ -2.04
VRK1-207ENST00000557352 ENTPD6O75354 484 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 GABARAPO95166 117 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 SOX14O95416 240 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 AHSA1O95433 338 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 RAB36O95755 333 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 FADS2O95864 444 aaKnown RBP2.3□□□□□ -2.04
VRK1-207ENST00000557352 CLUP10909 449 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 POU2F1P14859 743 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 CNR1P21554 472 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 F8A1P23610 371 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 CXCR1P25024 350 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 PSMA1P25786 263 aaKnown RBP2.3□□□□□ -2.04
VRK1-207ENST00000557352 FMO3P31513 532 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 GPR4P46093 362 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 RFX3P48380 749 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 CYB561P49447 251 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 DAP3P51398 398 aaKnown RBP2.3□□□□□ -2.04
VRK1-207ENST00000557352 FBXW4P57775 412 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 TAS2R43P59537 309 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 RAP1BP61224 184 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 RAP1AP62834 184 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 H3F3AP84243 136 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 HOXC5Q00444 222 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 EMX1Q04741 257 aaPredicted RBP2.3□□□□□ -2.04
VRK1-207ENST00000557352 RPL18Q07020 188 aaKnown RBP2.3□□□□□ -2.04
VRK1-207ENST00000557352 ST3GAL4Q11206 333 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 MLLT11Q13015 90 aaPredicted RBP2.3□□□□□ -2.04
VRK1-207ENST00000557352 MRPL28Q13084 256 aaKnown RBP2.3□□□□□ -2.04
VRK1-207ENST00000557352 PMS2P3Q13401 168 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 TPBGQ13641 420 aa2.3□□□□□ -2.04
VRK1-207ENST00000557352 C1DQ13901 141 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms