RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 RUSC1-AS1Q66K80 236 aa14.35□□□□□ -0.11
SHMT2-225ENST00000556798 BRD3OSQ6XYD6 125 aa14.35□□□□□ -0.11
SHMT2-225ENST00000556798 TRAPPC6BQ86SZ2 158 aa14.35□□□□□ -0.11
SHMT2-225ENST00000556798 OR13F1Q8NGS4 319 aa14.35□□□□□ -0.11
SHMT2-225ENST00000556798 KCNG3Q8TAE7 436 aa14.35□□□□□ -0.11
SHMT2-225ENST00000556798 NEK7Q8TDX7 302 aa14.35□□□□□ -0.11
SHMT2-225ENST00000556798 FAM3DQ96BQ1 224 aa14.35□□□□□ -0.11
SHMT2-225ENST00000556798 FUNDC2Q9BWH2 189 aa14.35□□□□□ -0.11
SHMT2-225ENST00000556798 ZNF69Q9UC07 566 aa14.35□□□□□ -0.11
SHMT2-225ENST00000556798 NUP50Q9UKX7 468 aa14.35□□□□□ -0.11
SHMT2-225ENST00000556798 SOX21Q9Y651 276 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-225ENST00000556798 A0A1W2PPH5 198 aa14.34□□□□□ -0.11
SHMT2-225ENST00000556798 ODAMA1E959 279 aa14.34□□□□□ -0.11
SHMT2-225ENST00000556798 AIPO00170 330 aa14.34□□□□□ -0.11
SHMT2-225ENST00000556798 DLX6P56179 175 aa14.34□□□□□ -0.11
SHMT2-225ENST00000556798 RPS27AP62979 156 aaKnown RBP14.34□□□□□ -0.11
SHMT2-225ENST00000556798 MEF2CQ06413 473 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-225ENST00000556798 PLA2G7Q13093 441 aa14.34□□□□□ -0.11
SHMT2-225ENST00000556798 C2orf76Q3KRA6 126 aa14.34□□□□□ -0.11
SHMT2-225ENST00000556798 NKAPLQ5M9Q1 402 aa14.34□□□□□ -0.11
SHMT2-225ENST00000556798 GPR157Q5UAW9 335 aa14.34□□□□□ -0.11
SHMT2-225ENST00000556798 RSBN1Q5VWQ0 802 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-225ENST00000556798 SIGIRRQ6IA17 410 aa14.34□□□□□ -0.11
SHMT2-225ENST00000556798 RAB12Q6IQ22 244 aa14.34□□□□□ -0.11
SHMT2-225ENST00000556798 OR2W3Q7Z3T1 314 aa14.34□□□□□ -0.11
SHMT2-225ENST00000556798 ZNF714Q96N38 554 aa14.34□□□□□ -0.11
SHMT2-225ENST00000556798 RCC2Q9P258 522 aaKnown RBP14.34□□□□□ -0.11
SHMT2-225ENST00000556798 LINC00312Q9Y6C7 94 aa14.34□□□□□ -0.11
SHMT2-225ENST00000556798 A0A0A6YYD4 124 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 CENPVL3A0A0U1RRI6 287 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 TMEM272A0A1B0GTI8 110 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 FUOMA2VDF0 154 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 FAM90A10PA6NDY2 464 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 FAM90A18PA6NE21 464 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 FAM90A16PA6NEW6 464 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 FAM90A20PA6NIJ5 464 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 FAM90A8PA6NJQ4 464 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 FAM90A7PA6NKC0 464 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 NOTOA8MTQ0 251 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 FAM90A22PA8MWA6 464 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 FAM90A12PA8MX19 464 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 FAM90A5PA8MXJ8 464 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 FAM90A23PA8MXZ1 464 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 FAM90A15PP0C7V4 464 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 FAM90A13PP0C7W8 464 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 FAM90A14PP0C7W9 464 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 FAM90A24PP0C7X0 464 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 ZNF728P0DKX0 622 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 CFPP27918 469 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 RIPPLY3P57055 190 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 ZNF782Q6ZMW2 699 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-225ENST00000556798 GDPGP1Q6ZNW5 385 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 RTN4RL2Q86UN3 420 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 TPRA1Q86W33 373 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 PRIMA1Q86XR5 153 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 BCL6BQ8N143 479 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-225ENST00000556798 C11orf42Q8N5U0 333 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 DYRK2Q92630 601 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 SLC6A7Q99884 636 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 LPAR5Q9H1C0 372 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 METTL8Q9H825 291 aaKnown RBP14.33□□□□□ -0.12
SHMT2-225ENST00000556798 LIN7BQ9HAP6 207 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 KIF25Q9UIL4 384 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 PEX16Q9Y5Y5 336 aa14.33□□□□□ -0.12
SHMT2-225ENST00000556798 MEIKINA0A087WXM9 373 aa14.32□□□□□ -0.12
SHMT2-225ENST00000556798 TRGV10A0A0A0MS01 117 aa14.32□□□□□ -0.12
SHMT2-225ENST00000556798 A0A1W2PRD5 423 aa14.32□□□□□ -0.12
SHMT2-225ENST00000556798 A0A1W2PRF3 423 aa14.32□□□□□ -0.12
SHMT2-225ENST00000556798 A0A1W2PRM7 423 aa14.32□□□□□ -0.12
SHMT2-225ENST00000556798 C17orf98A8MV24 154 aa14.32□□□□□ -0.12
SHMT2-225ENST00000556798 RNASEK-C17orf49H0YIS7 233 aa14.32□□□□□ -0.12
SHMT2-225ENST00000556798 LDLRAD4O15165 306 aa14.32□□□□□ -0.12
SHMT2-225ENST00000556798 TFAP2AP05549 437 aa14.32□□□□□ -0.12
SHMT2-225ENST00000556798 GLP1RP43220 463 aa14.32□□□□□ -0.12
SHMT2-225ENST00000556798 ALDH3B2P48448 385 aa14.32□□□□□ -0.12
SHMT2-225ENST00000556798 KCNJ3P48549 501 aa14.32□□□□□ -0.12
SHMT2-225ENST00000556798 SFXN4Q6P4A7 337 aa14.32□□□□□ -0.12
SHMT2-225ENST00000556798 C1orf122Q6ZSJ8 110 aa14.32□□□□□ -0.12
SHMT2-225ENST00000556798 PNKDQ8N490 385 aa14.32□□□□□ -0.12
SHMT2-225ENST00000556798 TNFRSF14Q92956 283 aa14.32□□□□□ -0.12
SHMT2-225ENST00000556798 TM2D1Q9BX74 207 aa14.32□□□□□ -0.12
SHMT2-225ENST00000556798 BARHL1Q9BZE3 327 aa14.32□□□□□ -0.12
SHMT2-225ENST00000556798 MS4A7Q9GZW8 240 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-225ENST00000556798 OCEL1Q9H607 264 aa14.32□□□□□ -0.12
SHMT2-225ENST00000556798 SPACA1Q9HBV2 294 aa14.32□□□□□ -0.12
SHMT2-225ENST00000556798 DAPK2Q9UIK4 370 aa14.32□□□□□ -0.12
SHMT2-225ENST00000556798 TRAV39A0A0B4J263 110 aa14.31□□□□□ -0.12
SHMT2-225ENST00000556798 IGHV1-69DA0A0B4J2H0 117 aa14.31□□□□□ -0.12
SHMT2-225ENST00000556798 MCRIP1C9JLW8 97 aa14.31□□□□□ -0.12
SHMT2-225ENST00000556798 PDCD6O75340 191 aa14.31□□□□□ -0.12
SHMT2-225ENST00000556798 IGHV1-69P01742 117 aa14.31□□□□□ -0.12
SHMT2-225ENST00000556798 FUT3P21217 361 aa14.31□□□□□ -0.12
SHMT2-225ENST00000556798 PRTN3P24158 256 aa14.31□□□□□ -0.12
SHMT2-225ENST00000556798 EFNB2P52799 333 aa14.31□□□□□ -0.12
SHMT2-225ENST00000556798 NCS1P62166 190 aa14.31□□□□□ -0.12
SHMT2-225ENST00000556798 OR13A1Q8NGR1 328 aa14.31□□□□□ -0.12
SHMT2-225ENST00000556798 URM1Q9BTM9 101 aaKnown RBP14.31□□□□□ -0.12
SHMT2-225ENST00000556798 NAA50Q9GZZ1 169 aaKnown RBP14.31□□□□□ -0.12
SHMT2-225ENST00000556798 UBE2J1Q9Y385 318 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-225ENST00000556798 MDFIC2A0A1B0GVS7 189 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms