RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 NPIPB11E5RHQ5 1161 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 CLIC3O95833 236 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 CYB5AP00167 134 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 ZNF44P15621 663 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 MYCNOSP40205 109 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 MNDAP41218 407 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 CCR9P51686 369 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 PRRX1P54821 245 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 SCN1BQ07699 218 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 TMED1Q13445 227 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 EBI3Q14213 229 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 DNAL1Q4LDG9 190 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 CCDC144NLQ6NUI1 221 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 Q8N6K4 173 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 CHST4Q8NCG5 386 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 PLPPR1Q8TBJ4 325 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 CHPT1Q8WUD6 406 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 RBMXL1Q96E39 390 aaKnown RBP11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 PELI1Q96FA3 418 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 OSBPL10Q9BXB5 764 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 CALYQ9NYX4 217 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 GLS2Q9UI32 602 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 SACSQ9NZJ4 4579 aa11.29□□□□□ -0.6
CHMP4BP1-201ENST00000556017 FGF16O43320 207 aa11.28□□□□□ -0.6
CHMP4BP1-201ENST00000556017 FAM106CPP0CH98 169 aa11.28□□□□□ -0.6
CHMP4BP1-201ENST00000556017 ZNF20P17024 532 aa11.28□□□□□ -0.6
CHMP4BP1-201ENST00000556017 NFYBP25208 207 aa11.28□□□□□ -0.6
CHMP4BP1-201ENST00000556017 ARHGDIBP52566 201 aa11.28□□□□□ -0.6
CHMP4BP1-201ENST00000556017 PAX5Q02548 391 aa11.28□□□□□ -0.6
CHMP4BP1-201ENST00000556017 RSBN1Q5VWQ0 802 aaPredicted RBP11.28□□□□□ -0.6
CHMP4BP1-201ENST00000556017 FAM53AQ6NSI3 398 aaPredicted RBP11.28□□□□□ -0.6
CHMP4BP1-201ENST00000556017 LCNL1Q6ZST4 164 aa11.28□□□□□ -0.6
CHMP4BP1-201ENST00000556017 ZDHHC13Q8IUH4 622 aa11.28□□□□□ -0.6
CHMP4BP1-201ENST00000556017 KLHL30-AS1Q8NEE0 82 aa11.28□□□□□ -0.6
CHMP4BP1-201ENST00000556017 Q8NFD4 153 aa11.28□□□□□ -0.6
CHMP4BP1-201ENST00000556017 OR51D1Q8NGF3 324 aa11.28□□□□□ -0.6
CHMP4BP1-201ENST00000556017 TOMM40LQ969M1 308 aa11.28□□□□□ -0.6
CHMP4BP1-201ENST00000556017 NCOR1P1Q9H4R4 102 aa11.28□□□□□ -0.6
CHMP4BP1-201ENST00000556017 RHOFQ9HBH0 211 aa11.28□□□□□ -0.6
CHMP4BP1-201ENST00000556017 ZFP57Q9NU63 452 aa11.28□□□□□ -0.6
CHMP4BP1-201ENST00000556017 OR6C3Q9NZP0 311 aa11.28□□□□□ -0.6
CHMP4BP1-201ENST00000556017 TRAV39A0A0B4J263 110 aa11.27□□□□□ -0.61
CHMP4BP1-201ENST00000556017 DEGS1O15121 323 aa11.27□□□□□ -0.61
CHMP4BP1-201ENST00000556017 SLC16A6O15403 523 aa11.27□□□□□ -0.61
CHMP4BP1-201ENST00000556017 IL1AP01583 271 aa11.27□□□□□ -0.61
CHMP4BP1-201ENST00000556017 SLC6A1P30531 599 aa11.27□□□□□ -0.61
CHMP4BP1-201ENST00000556017 LUMP51884 338 aaPredicted RBP11.27□□□□□ -0.61
CHMP4BP1-201ENST00000556017 HNF4GQ14541 408 aa11.27□□□□□ -0.61
CHMP4BP1-201ENST00000556017 KISS1Q15726 138 aa11.27□□□□□ -0.61
CHMP4BP1-201ENST00000556017 ELP2Q6IA86 826 aa11.27□□□□□ -0.61
CHMP4BP1-201ENST00000556017 FAM220AQ7Z4H9 259 aa11.27□□□□□ -0.61
CHMP4BP1-201ENST00000556017 KCTD20Q7Z5Y7 419 aa11.27□□□□□ -0.61
CHMP4BP1-201ENST00000556017 STPG2Q8N412 459 aa11.27□□□□□ -0.61
CHMP4BP1-201ENST00000556017 RFESDQ8TAC1 157 aa11.27□□□□□ -0.61
CHMP4BP1-201ENST00000556017 TFAP2CQ92754 450 aa11.27□□□□□ -0.61
CHMP4BP1-201ENST00000556017 RPEQ96AT9 228 aa11.27□□□□□ -0.61
CHMP4BP1-201ENST00000556017 HRASLS5Q96KN8 279 aa11.27□□□□□ -0.61
CHMP4BP1-201ENST00000556017 MCRIP2Q9BUT9 160 aaKnown RBP11.27□□□□□ -0.61
CHMP4BP1-201ENST00000556017 GPR61Q9BZJ8 451 aa11.27□□□□□ -0.61
CHMP4BP1-201ENST00000556017 ZCCHC4Q9H5U6 513 aa11.27□□□□□ -0.61
CHMP4BP1-201ENST00000556017 PLSCR3Q9NRY6 295 aa11.27□□□□□ -0.61
CHMP4BP1-201ENST00000556017 IDI2-AS1Q9NZ38 188 aa11.27□□□□□ -0.61
CHMP4BP1-201ENST00000556017 AASSQ9UDR5 926 aa11.27□□□□□ -0.61
CHMP4BP1-201ENST00000556017 A0A1W2PPE3 182 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 SERPINE3A8MV23 424 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 H0YJX3 145 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 HSPB6O14558 160 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 IGKV1D-33P01593 117 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 IGKV1-33P01594 117 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 RPLP1P05386 114 aaKnown RBP11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 TMEM11P17152 192 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 FASP25445 335 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 SSTR5P35346 364 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 GLP1RP43220 463 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 DGCR2P98153 550 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 CFHR3Q02985 330 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 DEFB136Q30KP8 78 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 SLC25A30Q5SVS4 291 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 ZNF529Q6P280 563 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 SLC35E3Q7Z769 313 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 ZNF695Q8IW36 515 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 RNF152Q8N8N0 203 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 TMEM104Q8NE00 496 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 OR13C3Q8NGS6 347 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 CNIH3Q8TBE1 160 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 RIBC2Q9H4K1 309 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 DCLRE1BQ9H816 532 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 PCDHB16Q9NRJ7 776 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 SCOCQ9UIL1 159 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 OAZ3Q9UMX2 235 aa11.26□□□□□ -0.61
CHMP4BP1-201ENST00000556017 SORL1Q92673 2214 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 MEIKINA0A087WXM9 373 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 E9PI62 339 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 CCL24O00175 119 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 ZFPL1O95159 310 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 HTR1AP08908 422 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 ATP6V1E1P36543 226 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 MTNR1BP49286 362 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 RAB7AP51149 207 aa11.25□□□□□ -0.61
CHMP4BP1-201ENST00000556017 ZNF816Q0VGE8 651 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms