RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 TRBC1P01850 177 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 HLA-AP01891 365 aaKnown RBP0.48□□□□□ -2.33
SRP54-207ENST00000555535 CRYGDP07320 174 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 STAG3L3P0CL85 134 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 PSMB9P28065 219 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 HTR2CP28335 458 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 MAGEA3P43357 314 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 OR2B6P58173 313 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 TAS2R39P59534 338 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 STX4Q12846 297 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 DYNC1I2Q13409 638 aaKnown RBP0.48□□□□□ -2.33
SRP54-207ENST00000555535 TAL2Q16559 108 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 LINC00303Q3SY05 128 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 ATP6AP1LQ52LC2 224 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 CLLU1OSQ5K130 101 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 IDNKQ5T6J7 187 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 CYP4Z1Q86W10 505 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 RPRMLQ8N4K4 120 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 C3orf22Q8N5N4 141 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 FER1L6-AS1Q8NA97 138 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 OR51L1Q8NGJ5 315 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 ZFAND1Q8TCF1 268 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 GLYATL2Q8WU03 294 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 PEX13Q92968 403 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 RILPQ96NA2 401 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 SHCBP1LQ9BZQ2 653 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 WDR55Q9H6Y2 383 aaPredicted RBP0.48□□□□□ -2.33
SRP54-207ENST00000555535 ANKHQ9HCJ1 492 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 CCL26Q9Y258 94 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 PHLDA3Q9Y5J5 127 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 MINOS1-NBL1R4GNA1 71 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 DSCAML1Q8TD84 2053 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 HEATR5AQ86XA9 2040 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 NEURL4Q96JN8 1562 aa0.48□□□□□ -2.33
SRP54-207ENST00000555535 CRB1P82279 1406 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 KIAA2026Q5HYC2 2103 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 COL6A6A6NMZ7 2263 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 DLG5Q8TDM6 1919 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 TRAV8-3A0A0A6YYJ7 113 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 A0A0J9YX75 114 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 A0A1B0GTQ1 180 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 IGSF23A1L1A6 192 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 SIGLEC16A6NMB1 481 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 ZNF701M0R085 212 aaPredicted RBP0.47□□□□□ -2.33
SRP54-207ENST00000555535 UPK2O00526 184 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 SLC25A20O43772 301 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 SLC37A4O43826 429 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 MYO1DO94832 1006 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 ETHE1O95571 254 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 OPN1SWP03999 348 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 RALBP11234 206 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 IVDP26440 423 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 BLVRBP30043 206 aaPredicted RBP0.47□□□□□ -2.33
SRP54-207ENST00000555535 DEKP35659 375 aaKnown RBP0.47□□□□□ -2.33
SRP54-207ENST00000555535 ARR3P36575 388 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 PEX19P40855 299 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 CSKP41240 450 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 HTR2BP41595 481 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 CBX5P45973 191 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 HINT1P49773 126 aaPredicted RBP0.47□□□□□ -2.33
SRP54-207ENST00000555535 CLDN18P56856 261 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 TAS2R60P59551 318 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 DOC2AQ14183 400 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 Q499Y3 187 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 C10orf91Q5T1B1 145 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 SLC35D2Q76EJ3 337 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 TCF24Q7RTU0 167 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 MUC15Q8N387 334 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 TCAIMQ8N3R3 496 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 PDCL2Q8N4E4 241 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 C2orf73Q8N5S3 287 aaPredicted RBP0.47□□□□□ -2.33
SRP54-207ENST00000555535 DRAXINQ8NBI3 349 aaPredicted RBP0.47□□□□□ -2.33
SRP54-207ENST00000555535 OR8A1Q8NGG7 326 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 OR4A15Q8NGL6 344 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 OR4C16Q8NGL9 310 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 SPPL2BQ8TCT7 592 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 CCL17Q92583 94 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 REEP6Q96HR9 211 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 CAPZA3Q96KX2 299 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 OLFM3Q96PB7 478 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 VAT1Q99536 393 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 GPR22Q99680 433 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 BCL2L14Q9BZR8 327 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 MFSD1Q9H3U5 465 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 RGCCQ9H4X1 137 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 HAUS4Q9H6D7 363 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 PLEKHA1Q9HB21 404 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 SDHAF2Q9NX18 166 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 FAM206AQ9NX38 181 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 TFR2Q9UP52 801 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 POMPQ9Y244 141 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 AP3M1Q9Y2T2 418 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 AMMECR1Q9Y4X0 333 aaPredicted RBP0.47□□□□□ -2.33
SRP54-207ENST00000555535 FADS3Q9Y5Q0 445 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 V9GYY9 64 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 ADGRB3O60242 1522 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 PXDNLA1KZ92 1463 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 RGS12O14924 1447 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 NOS1P29475 1434 aa0.47□□□□□ -2.33
SRP54-207ENST00000555535 PTPRKQ15262 1439 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms