RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 ACAA1P09110 424 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-212ENST00000554486 PGA5P0DJD9 388 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 LYNX1P0DP58 116 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 BCL3P20749 454 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 COL8A2P25067 703 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 HTR2CP28335 458 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 NPBWR2P48146 333 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 RORCP51449 518 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 ERVK11-1P61568 191 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 CNPY1Q3B7I2 92 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 FAM201AQ5SY85 155 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 IDNKQ5T6J7 187 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 AWAT2Q6E213 333 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 OR10K2Q6IF99 312 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 GLIPR1L1Q6UWM5 242 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 WDR82Q6UXN9 313 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 MKXQ8IYA7 352 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 BATF2Q8N1L9 274 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 POC1AQ8NBT0 407 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 TMEM104Q8NE00 496 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 Q8NFD4 153 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 OR51D1Q8NGF3 324 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 OR5H6Q8NGV6 325 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 OR10K1Q8NGX5 313 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 OR10Z1Q8NGY1 313 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 OR51F2Q8NH61 342 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 OSR1Q8TAX0 266 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-212ENST00000554486 LGALS14Q8TCE9 139 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 LRRC29Q8WV35 223 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 ERGIC1Q969X5 290 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 FAM3DQ96BQ1 224 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 CPNE2Q96FN4 548 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-212ENST00000554486 NRIP2Q9BQI9 281 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 FN3KRPQ9HA64 309 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 HES4Q9HCC6 221 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 ZNF701Q9NV72 531 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-212ENST00000554486 RBFOX1Q9NWB1 397 aaKnown RBP5.25□□□□□ -1.57
SCFD1-212ENST00000554486 IL36GQ9NZH8 169 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 PPP1R3CQ9UQK1 317 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 PLEKHA6Q9Y2H5 1048 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 MED13LQ71F56 2210 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 DOCK11Q5JSL3 2073 aa5.25□□□□□ -1.57
SCFD1-212ENST00000554486 CCDC168Q8NDH2 2452 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 TMEM272A0A1B0GTI8 110 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 hCG_1807616A0A1W2PRN6 198 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 TMEM14DPA8MWL7 114 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 SRRM5B3KS81 715 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 TRAPPC2LH3BP13 241 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 TMEM178BH3BS89 294 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 CYB5R3P00387 301 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-212ENST00000554486 IGHV4-39P01824 125 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 UBBP0CG47 229 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 CALCBP10092 127 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 ARSBP15848 533 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 PAX1P15863 534 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 SERPINA2P20848 420 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 CD80P33681 288 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 SOX6P35712 828 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 EFNA4P52798 201 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 MRPS11P82912 194 aaKnown RBP5.24□□□□□ -1.57
SCFD1-212ENST00000554486 SRSF4Q08170 494 aaKnown RBP5.24□□□□□ -1.57
SCFD1-212ENST00000554486 UNC119Q13432 240 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 RSU1Q15404 277 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 DGUOKQ16854 277 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 ZNF181Q2M3W8 571 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 C2orf76Q3KRA6 126 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 SLC22A6Q4U2R8 563 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 ELP2Q6IA86 826 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 TMEM88Q6PEY1 159 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 BIVMQ86UB2 503 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 CROCCP3Q8IVE0 287 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 GCSAMQ8N6F7 178 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 ZNF671Q8TAW3 534 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 RDH5Q92781 318 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 SLC25A38Q96DW6 304 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 SEH1LQ96EE3 360 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 CEP19Q96LK0 163 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 ABHD14AQ9BUJ0 271 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 NXF2Q9GZY0 626 aaKnown RBP5.24□□□□□ -1.57
SCFD1-212ENST00000554486 METTL9Q9H1A3 318 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 WDR13Q9H1Z4 485 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 BANF2Q9H503 90 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 CXorf56Q9H5V9 222 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 ELL3Q9HB65 397 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-212ENST00000554486 HMG20AQ9NP66 347 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 TMEM106BQ9NUM4 274 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 ZNF581Q9P0T4 197 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 RNF7Q9UBF6 113 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 IL36RNQ9UBH0 155 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 GHRLQ9UBU3 117 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 SPATA2Q9UM82 520 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 POLDIP2Q9Y2S7 368 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 NOTCH2Q04721 2471 aa5.24□□□□□ -1.57
SCFD1-212ENST00000554486 A0A075B6Q4 140 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 IGHV3OR15-7A0A075B7D8 119 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 A0A0A6YYD4 124 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 IFNL4K9M1U5 179 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 CTDSP2O14595 271 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 NXPH2O95156 264 aa5.23□□□□□ -1.57
SCFD1-212ENST00000554486 CYB5AP00167 134 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms