RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 FAM230AA0A1W2PPH8 454 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 LINC01548A6NM66 108 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 SERPINE3A8MV23 424 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 ENTPD6O75354 484 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 ZNF254O75437 659 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 E2F6O75461 281 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 MRPL3P09001 348 aaKnown RBP5.67□□□□□ -1.5
ATXN3-219ENST00000553488 FRMD6-AS1P0C7T7 363 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 H2AFXP16104 143 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-219ENST00000553488 GABRR1P24046 479 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 PRDX6P30041 224 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 CEACAM3P40198 252 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 CDX1P47902 265 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-219ENST00000553488 RIDAP52758 137 aaKnown RBP5.67□□□□□ -1.5
ATXN3-219ENST00000553488 ESRRGP62508 458 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 SLC35B1P78383 322 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 CFHR3Q02985 330 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 TRIM25Q14258 630 aaKnown RBP5.67□□□□□ -1.5
ATXN3-219ENST00000553488 KIR2DS1Q14954 304 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 ZNF146Q15072 292 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 UBE2V2Q15819 145 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 ASPHD1Q5U4P2 390 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 ADAMTSL5Q6ZMM2 481 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 Q6ZRM9 215 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 SLC25A26Q70HW3 274 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 SLC35E3Q7Z769 313 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 TRAPPC6BQ86SZ2 158 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 CPOQ8IVL8 374 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 ELMOD2Q8IZ81 293 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 PGAM4Q8N0Y7 254 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 EMG1Q92979 244 aaKnown RBP5.67□□□□□ -1.5
ATXN3-219ENST00000553488 CREB3L1Q96BA8 519 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 CMTM5Q96DZ9 223 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 COQ2Q96H96 371 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 PALMDQ9NP74 551 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 ING3Q9NXR8 418 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 TAS2R3Q9NYW6 316 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 NKX1-2Q9UD57 310 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-219ENST00000553488 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.67□□□□□ -1.5
ATXN3-219ENST00000553488 SLC7A11Q9UPY5 501 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 SAMHD1Q9Y3Z3 626 aaKnown RBP5.67□□□□□ -1.5
ATXN3-219ENST00000553488 R4GMQ9 66 aa5.67□□□□□ -1.5
ATXN3-219ENST00000553488 TRGV10A0A0A0MS01 117 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 LOC110117498-PIK3R3F6TDL0 507 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 H3BN98 237 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 SIRPB1O00241 398 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 CCRL2O00421 344 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 INMTO95050 263 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 CSN2P05814 226 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 HCKP08631 526 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 FAM106CPP0CH98 169 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 TMEM11P17152 192 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 BCL3P20749 454 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 DUSP1P28562 367 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 MNDAP41218 407 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 PTGFRP43088 359 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 GPR12P47775 334 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 GLIPR1P48060 266 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 NPBWR2P48146 333 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 RPS7P62081 194 aaKnown RBP5.66□□□□□ -1.5
ATXN3-219ENST00000553488 CDK5Q00535 292 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 APOFQ13790 326 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 DIAPH2-AS1Q14236 149 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 GINS1Q14691 196 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 C17orf58Q2M2W7 97 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 ZNF260Q3ZCT1 412 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 SPIN3Q5JUX0 258 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 BCL2L15Q5TBC7 163 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 SLX4IPQ5VYV7 408 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 OR2T5Q6IEZ7 315 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 TEX38Q6PEX7 206 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 C16orf89Q6UX73 402 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 PLEKHG7Q6ZR37 379 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 OVCH2Q7RTZ1 564 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 FOXRED2Q8IWF2 684 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 Q8IYB0 196 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 ENTHD1Q8IYW4 607 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 DRAM1Q8N682 238 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 Q8N6K4 173 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 OR2T29Q8NH02 315 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 MYOZ3Q8TDC0 251 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 C4orf3Q8WVX3 66 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 ASB17Q8WXJ9 295 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 TOMM40LQ969M1 308 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 RPEQ96AT9 228 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 LRGUKQ96M69 825 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 CDRT15Q96T59 188 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 FEVQ99581 238 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 TM2D3Q9BRN9 247 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 CHST5Q9GZS9 411 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 MAGIXQ9H6Y5 334 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 REEP1Q9H902 201 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 OR52A1Q9UKL2 312 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 IKZF2Q9UKS7 526 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 GTF2A1LQ9UNN4 478 aa5.66□□□□□ -1.5
ATXN3-219ENST00000553488 ODAMA1E959 279 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 AP4M1O00189 453 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 TOR1AO14656 332 aa5.65□□□□□ -1.5
ATXN3-219ENST00000553488 MAGEB4O15481 346 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-219ENST00000553488 RRP9O43818 475 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms