RNA–Protein interactions for RNA: ENST00000552573.6

TGFBR1-210, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 4

Gene TGFBR1, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-210ENST00000552573 MED10Q9BTT4 135 aa0.54□□□□□ -2.32
TGFBR1-210ENST00000552573 NXF2Q9GZY0 626 aaKnown RBP0.54□□□□□ -2.32
TGFBR1-210ENST00000552573 TOLLIPQ9H0E2 274 aa0.54□□□□□ -2.32
TGFBR1-210ENST00000552573 GABARAPL1Q9H0R8 117 aa0.54□□□□□ -2.32
TGFBR1-210ENST00000552573 SPACA1Q9HBV2 294 aa0.54□□□□□ -2.32
TGFBR1-210ENST00000552573 PARP11Q9NR21 331 aa0.54□□□□□ -2.32
TGFBR1-210ENST00000552573 KCNIP2Q9NS61 270 aa0.54□□□□□ -2.32
TGFBR1-210ENST00000552573 UBAP1Q9NZ09 502 aa0.54□□□□□ -2.32
TGFBR1-210ENST00000552573 VAPAQ9P0L0 249 aa0.54□□□□□ -2.32
TGFBR1-210ENST00000552573 SLC22A14Q9Y267 594 aa0.54□□□□□ -2.32
TGFBR1-210ENST00000552573 AP3M1Q9Y2T2 418 aa0.54□□□□□ -2.32
TGFBR1-210ENST00000552573 SLC22A7Q9Y694 548 aa0.54□□□□□ -2.32
TGFBR1-210ENST00000552573 ICOSQ9Y6W8 199 aa0.54□□□□□ -2.32
TGFBR1-210ENST00000552573 URGCP-MRPS24S4R325 110 aa0.54□□□□□ -2.32
TGFBR1-210ENST00000552573 JCADQ9P266 1359 aa0.54□□□□□ -2.32
TGFBR1-210ENST00000552573 AQRO60306 1485 aaKnown RBP eCLIP0.54□□□□□ -2.32
TGFBR1-210ENST00000552573 PLXNB1O43157 2135 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 TRAV8-2A0A0B4J237 113 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 A0A1B0GTI1 187 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 A0A1B0GXF2 115 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 GSTTP1A0A1W2PQM5 241 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 A0A1W2PRG6 482 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 VPS37CA5D8V6 355 aaPredicted RBP0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 IZUMO1RA6ND01 250 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 FABP12A6NFH5 140 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 ARGFXA6NJG6 315 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 ZNF729A6NN14 1252 aaPredicted RBP0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 OR2AT4A6NND4 320 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 EFCAB9A8MZ26 197 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 C8orf87E5RJ46 101 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 E7EWF7 191 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 K7ERS5 55 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 GPR171O14626 319 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 CDIPTO14735 213 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 OVOL1O14753 267 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 FFAR1O14842 300 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 TCAPO15273 167 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 POLR3GO15318 223 aaPredicted RBP0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 GYG2O15488 501 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 FABP7O15540 132 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 EEF1E1O43324 174 aaKnown RBP0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 COCHO43405 550 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 CALUO43852 315 aaPredicted RBP0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 CPSF4O95639 269 aaKnown RBP0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 RAB36O95755 333 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 CST4P01036 141 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 IGKV1D-33P01593 117 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 IGKV1-33P01594 117 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 TPM3P06753 285 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 FBP1P09467 338 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 OR4Q2P0C623 313 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 OR5AC1P0C628 307 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 GTF2F2P13984 249 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 GABRA1P14867 456 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 PRTN3P24158 256 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 TEAD1P28347 426 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 IMPA1P29218 277 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 CRABP2P29373 138 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 TSPOP30536 169 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 PYCR1P32322 319 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 KDELR2P33947 212 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 GABRA3P34903 492 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 EVI2BP34910 448 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 RPA3P35244 121 aaPredicted RBP0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 PCK1P35558 622 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 PPP1CCP36873 323 aaKnown RBP0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 HTR2BP41595 481 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 CBX5P45973 191 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 LGALS7P47929 136 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 GCLMP48507 274 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 DNASE1L1P49184 302 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 BLVRAP53004 296 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 GABARAPL2P60520 117 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 ACTBP60709 375 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 TSPAN5P62079 268 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 ACTG1P63261 375 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 SMAGPQ0VAQ4 97 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 KRTAP21-3Q3LHN1 58 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 ZNF404Q494X3 552 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 DNAL1Q4LDG9 190 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 CLEC12AQ5QGZ9 265 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 LDLRAD2Q5SZI1 272 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 HES3Q5TGS1 186 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 CLEC18BQ6UXF7 455 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 TPGS1Q6ZTW0 290 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 TRMT10CQ7L0Y3 403 aaKnown RBP0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 OLIG3Q7RTU3 272 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 DPPA2Q7Z7J5 298 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 RIBC1Q8N443 379 aaPredicted RBP0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 OTUD6BQ8N6M0 293 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 ZFP62Q8NB50 900 aaPredicted RBP0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 OR11G2Q8NGC1 345 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 OR4K17Q8NGC6 315 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 OR4C13Q8NGP0 309 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 OR5H2Q8NGV7 314 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 OR11L1Q8NGX0 322 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 OR51Q1Q8NH59 317 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 ZFAND1Q8TCF1 268 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 TMEM239Q8WW34 195 aa0.53□□□□□ -2.32
TGFBR1-210ENST00000552573 C19orf60Q96EN9 201 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms