RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 HUWE1Q7Z6Z7 4374 aaKnown RBP11.17□□□□□ -0.62
CHMP1A-210ENST00000551981 LYSTQ99698 3801 aa11.16□□□□□ -0.62
CHMP1A-210ENST00000551981 TENM2Q9NT68 2774 aa11.16□□□□□ -0.62
CHMP1A-210ENST00000551981 SEC14L6B5MCN3 397 aa11.16□□□□□ -0.62
CHMP1A-210ENST00000551981 AP4M1O00189 453 aa11.16□□□□□ -0.62
CHMP1A-210ENST00000551981 SLC33A1O00400 549 aaPredicted RBP11.16□□□□□ -0.62
CHMP1A-210ENST00000551981 DEGS1O15121 323 aa11.16□□□□□ -0.62
CHMP1A-210ENST00000551981 IGKV1D-33P01593 117 aa11.16□□□□□ -0.62
CHMP1A-210ENST00000551981 IGKV1-33P01594 117 aa11.16□□□□□ -0.62
CHMP1A-210ENST00000551981 CHATP28329 748 aa11.16□□□□□ -0.62
CHMP1A-210ENST00000551981 GLP1RP43220 463 aa11.16□□□□□ -0.62
CHMP1A-210ENST00000551981 EFNB1P98172 346 aa11.16□□□□□ -0.62
CHMP1A-210ENST00000551981 KIR2DS1Q14954 304 aa11.16□□□□□ -0.62
CHMP1A-210ENST00000551981 CASC10Q5T4H9 136 aa11.16□□□□□ -0.62
CHMP1A-210ENST00000551981 TMEM244Q5VVB8 128 aa11.16□□□□□ -0.62
CHMP1A-210ENST00000551981 SPATA24Q86W54 205 aa11.16□□□□□ -0.62
CHMP1A-210ENST00000551981 RDH10Q8IZV5 341 aa11.16□□□□□ -0.62
CHMP1A-210ENST00000551981 RFT1Q96AA3 541 aa11.16□□□□□ -0.62
CHMP1A-210ENST00000551981 FGGYQ96C11 551 aa11.16□□□□□ -0.62
CHMP1A-210ENST00000551981 IL4I1Q96RQ9 567 aa11.16□□□□□ -0.62
CHMP1A-210ENST00000551981 CALYQ9NYX4 217 aa11.16□□□□□ -0.62
CHMP1A-210ENST00000551981 GNG8Q9UK08 70 aa11.16□□□□□ -0.62
CHMP1A-210ENST00000551981 SIRT4Q9Y6E7 314 aaPredicted RBP11.16□□□□□ -0.62
CHMP1A-210ENST00000551981 IGKV1-12A0A0C4DH73 117 aa11.15□□□□□ -0.62
CHMP1A-210ENST00000551981 FKBP6O75344 327 aa11.15□□□□□ -0.62
CHMP1A-210ENST00000551981 IGKV1D-12P01611 117 aa11.15□□□□□ -0.62
CHMP1A-210ENST00000551981 RPLP1P05386 114 aaKnown RBP11.15□□□□□ -0.62
CHMP1A-210ENST00000551981 C21orf33P30042 268 aaPredicted RBP11.15□□□□□ -0.62
CHMP1A-210ENST00000551981 ATP6V1E1P36543 226 aa11.15□□□□□ -0.62
CHMP1A-210ENST00000551981 CDX1P47902 265 aaPredicted RBP11.15□□□□□ -0.62
CHMP1A-210ENST00000551981 DAPP51397 102 aa11.15□□□□□ -0.62
CHMP1A-210ENST00000551981 FOXE3Q13461 319 aa11.15□□□□□ -0.62
CHMP1A-210ENST00000551981 DEFB136Q30KP8 78 aa11.15□□□□□ -0.62
CHMP1A-210ENST00000551981 UTF1Q5T230 341 aa11.15□□□□□ -0.62
CHMP1A-210ENST00000551981 Q6P435 159 aa11.15□□□□□ -0.62
CHMP1A-210ENST00000551981 LCNL1Q6ZST4 164 aa11.15□□□□□ -0.62
CHMP1A-210ENST00000551981 TGIF2LXQ8IUE1 241 aa11.15□□□□□ -0.62
CHMP1A-210ENST00000551981 SAXO1Q8IYX7 474 aa11.15□□□□□ -0.62
CHMP1A-210ENST00000551981 OR10X1Q8NGY0 326 aa11.15□□□□□ -0.62
CHMP1A-210ENST00000551981 PPIL3Q9H2H8 161 aaKnown RBP11.15□□□□□ -0.62
CHMP1A-210ENST00000551981 IDI2-AS1Q9NZ38 188 aa11.15□□□□□ -0.62
CHMP1A-210ENST00000551981 PSG11Q9UQ72 335 aa11.15□□□□□ -0.62
CHMP1A-210ENST00000551981 ZNF256Q9Y2P7 627 aaPredicted RBP11.15□□□□□ -0.62
CHMP1A-210ENST00000551981 MEIKINA0A087WXM9 373 aa11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 ZAR1LA6NP61 321 aa11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 NCBP2LA6PVI3 153 aaKnown RBP11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 RRP9O43818 475 aaKnown RBP11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 IL1AP01583 271 aa11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 IGHV3-7P01780 117 aa11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 ELANEP08246 267 aa11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 HTR1FP30939 366 aa11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 KIR3DL2P43630 455 aa11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 GPR12P47775 334 aa11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 GNGT1P63211 74 aa11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 GPR50Q13585 617 aa11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 FLOT2Q14254 428 aa11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 C12orf73Q69YU5 71 aa11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 SLC16A12Q6ZSM3 486 aa11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 OR51T1Q8NGJ9 327 aa11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 OR5D18Q8NGL1 313 aa11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 LEAP2Q969E1 77 aa11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 THTPAQ9BU02 230 aa11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 BARHL1Q9BZE3 327 aa11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 LIN7CQ9NUP9 197 aaKnown RBP11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 ENOPH1Q9UHY7 261 aa11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 SMAD5-AS1Q9Y6J3 95 aa11.14□□□□□ -0.63
CHMP1A-210ENST00000551981 HSD17B6O14756 317 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 MPZL2O60487 215 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 APOL3O95236 402 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 LY86O95711 162 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 MT-ND2P03891 347 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 ISG15P05161 165 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 CGB3P0DN86 165 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 CGB7P0DN87 165 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 GNG10P50151 68 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 DOC2BQ14184 412 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 DIAPH2-AS1Q14236 149 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 LTC4SQ16873 150 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 ZNF260Q3ZCT1 412 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 PAN3Q58A45 887 aaKnown RBP11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 OR10A7Q8NGE5 316 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 OR13A1Q8NGR1 328 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 OR13C9Q8NGT0 318 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 SPACA5Q96QH8 159 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 MBOAT4Q96T53 435 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 OSBPL10Q9BXB5 764 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 ABCG5Q9H222 651 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 NCOR1P1Q9H4R4 102 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 LINC00574Q9H8X3 128 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 PALMDQ9NP74 551 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 SCOCQ9UIL1 159 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 KIF25Q9UIL4 384 aa11.13□□□□□ -0.63
CHMP1A-210ENST00000551981 LINC01548A6NM66 108 aa11.12□□□□□ -0.63
CHMP1A-210ENST00000551981 H0YJX3 145 aa11.12□□□□□ -0.63
CHMP1A-210ENST00000551981 CCRL2O00421 344 aa11.12□□□□□ -0.63
CHMP1A-210ENST00000551981 HSPB6O14558 160 aa11.12□□□□□ -0.63
CHMP1A-210ENST00000551981 MITFO75030 526 aaPredicted RBP11.12□□□□□ -0.63
CHMP1A-210ENST00000551981 GAPDHP04406 335 aaKnown RBP11.12□□□□□ -0.63
CHMP1A-210ENST00000551981 LYL1P12980 280 aa11.12□□□□□ -0.63
CHMP1A-210ENST00000551981 INSL3P51460 131 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms