RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 OR2W3Q7Z3T1 314 aa13.34□□□□□ -0.27
CHMP1A-209ENST00000550872 VMO1Q7Z5L0 202 aa13.34□□□□□ -0.27
CHMP1A-209ENST00000550872 Q8N7P7 452 aa13.34□□□□□ -0.27
CHMP1A-209ENST00000550872 NEK7Q8TDX7 302 aa13.34□□□□□ -0.27
CHMP1A-209ENST00000550872 COQ2Q96H96 371 aa13.34□□□□□ -0.27
CHMP1A-209ENST00000550872 FUNDC2Q9BWH2 189 aa13.34□□□□□ -0.27
CHMP1A-209ENST00000550872 BARHL1Q9BZE3 327 aa13.34□□□□□ -0.27
CHMP1A-209ENST00000550872 SPACA1Q9HBV2 294 aa13.34□□□□□ -0.27
CHMP1A-209ENST00000550872 SIRT7Q9NRC8 400 aa13.34□□□□□ -0.27
CHMP1A-209ENST00000550872 NUP50Q9UKX7 468 aa13.34□□□□□ -0.27
CHMP1A-209ENST00000550872 DSCAML1Q8TD84 2053 aa13.33□□□□□ -0.27
CHMP1A-209ENST00000550872 TRAV40A0A0B4J280 105 aa13.33□□□□□ -0.28
CHMP1A-209ENST00000550872 NOTOA8MTQ0 251 aa13.33□□□□□ -0.28
CHMP1A-209ENST00000550872 H3BUI4 141 aa13.33□□□□□ -0.28
CHMP1A-209ENST00000550872 TFAP2AP05549 437 aa13.33□□□□□ -0.28
CHMP1A-209ENST00000550872 CLEC2LP0C7M8 214 aa13.33□□□□□ -0.28
CHMP1A-209ENST00000550872 IGHV4-38-2P0DP08 117 aa13.33□□□□□ -0.28
CHMP1A-209ENST00000550872 KCNJ3P48549 501 aa13.33□□□□□ -0.28
CHMP1A-209ENST00000550872 RPS27AP62979 156 aaKnown RBP13.33□□□□□ -0.28
CHMP1A-209ENST00000550872 GPR157Q5UAW9 335 aa13.33□□□□□ -0.28
CHMP1A-209ENST00000550872 BRICD5Q6PL45 260 aa13.33□□□□□ -0.28
CHMP1A-209ENST00000550872 TRAPPC6BQ86SZ2 158 aa13.33□□□□□ -0.28
CHMP1A-209ENST00000550872 NR2C2APQ86WQ0 139 aa13.33□□□□□ -0.28
CHMP1A-209ENST00000550872 PLPPR1Q8TBJ4 325 aa13.33□□□□□ -0.28
CHMP1A-209ENST00000550872 URM1Q9BTM9 101 aaKnown RBP13.33□□□□□ -0.28
CHMP1A-209ENST00000550872 METTL8Q9H825 291 aaKnown RBP13.33□□□□□ -0.28
CHMP1A-209ENST00000550872 PEX16Q9Y5Y5 336 aa13.33□□□□□ -0.28
CHMP1A-209ENST00000550872 LINC00312Q9Y6C7 94 aa13.33□□□□□ -0.28
CHMP1A-209ENST00000550872 TRGV10A0A0A0MS01 117 aa13.32□□□□□ -0.28
CHMP1A-209ENST00000550872 hCG_1809904A0A1W2PP81 198 aa13.32□□□□□ -0.28
CHMP1A-209ENST00000550872 A0A1W2PPE2 198 aa13.32□□□□□ -0.28
CHMP1A-209ENST00000550872 A0A1W2PR64 198 aa13.32□□□□□ -0.28
CHMP1A-209ENST00000550872 A0A1W2PRV1 198 aa13.32□□□□□ -0.28
CHMP1A-209ENST00000550872 ODAMA1E959 279 aa13.32□□□□□ -0.28
CHMP1A-209ENST00000550872 MCRIP1C9JLW8 97 aa13.32□□□□□ -0.28
CHMP1A-209ENST00000550872 AIPO00170 330 aa13.32□□□□□ -0.28
CHMP1A-209ENST00000550872 ZNF728P0DKX0 622 aa13.32□□□□□ -0.28
CHMP1A-209ENST00000550872 SLC2A2P11168 524 aaPredicted RBP13.32□□□□□ -0.28
CHMP1A-209ENST00000550872 FUT3P21217 361 aa13.32□□□□□ -0.28
CHMP1A-209ENST00000550872 EPHA1P21709 976 aa13.32□□□□□ -0.28
CHMP1A-209ENST00000550872 PRTN3P24158 256 aa13.32□□□□□ -0.28
CHMP1A-209ENST00000550872 PRB3Q04118 309 aaPredicted RBP13.32□□□□□ -0.28
CHMP1A-209ENST00000550872 SCGB2A2Q13296 93 aa13.32□□□□□ -0.28
CHMP1A-209ENST00000550872 RBM39Q14498 530 aaKnown RBP13.32□□□□□ -0.28
CHMP1A-209ENST00000550872 RAB12Q6IQ22 244 aa13.32□□□□□ -0.28
CHMP1A-209ENST00000550872 LHX4Q969G2 390 aa13.32□□□□□ -0.28
CHMP1A-209ENST00000550872 NEDD4LQ96PU5 975 aa13.32□□□□□ -0.28
CHMP1A-209ENST00000550872 TM2D1Q9BX74 207 aa13.32□□□□□ -0.28
CHMP1A-209ENST00000550872 RCC2Q9P258 522 aaKnown RBP13.32□□□□□ -0.28
CHMP1A-209ENST00000550872 KIF25Q9UIL4 384 aa13.32□□□□□ -0.28
CHMP1A-209ENST00000550872 ATRQ13535 2644 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 MEIKINA0A087WXM9 373 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 A0A0B4J203 849 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 CENPVL3A0A0U1RRI6 287 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 TMEM272A0A1B0GTI8 110 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 PDCD6O75340 191 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 FPR2P25090 351 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 CFPP27918 469 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 TGFBR1P36897 503 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 ALDH3B2P48448 385 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 DLX1P56177 255 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 DLX6P56179 175 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 NKAPLQ5M9Q1 402 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 RSBN1Q5VWQ0 802 aaPredicted RBP13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 SIGIRRQ6IA17 410 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 TCF23Q7RTU1 214 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 GPR141Q7Z602 305 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 PDZD9Q8IXQ8 264 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 C11orf42Q8N5U0 333 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 C22orf15Q8WYQ4 148 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 ZNF714Q96N38 554 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 NICN1Q9BSH3 213 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 MS4A7Q9GZW8 240 aaPredicted RBP13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 LPAR5Q9H1C0 372 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 LIN7BQ9HAP6 207 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 OR6C3Q9NZP0 311 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 FBLN5Q9UBX5 448 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 ZNF69Q9UC07 566 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 DAPK2Q9UIK4 370 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 RAB22AQ9UL26 194 aa13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 UBE2J1Q9Y385 318 aaPredicted RBP13.31□□□□□ -0.28
CHMP1A-209ENST00000550872 COL6A5A8TX70 2615 aa13.3□□□□□ -0.28
CHMP1A-209ENST00000550872 UBE2QL1A1L167 161 aa13.3□□□□□ -0.28
CHMP1A-209ENST00000550872 C17orf98A8MV24 154 aa13.3□□□□□ -0.28
CHMP1A-209ENST00000550872 LDLRAD4O15165 306 aa13.3□□□□□ -0.28
CHMP1A-209ENST00000550872 IFNA2P01563 188 aa13.3□□□□□ -0.28
CHMP1A-209ENST00000550872 GLAP06280 429 aa13.3□□□□□ -0.28
CHMP1A-209ENST00000550872 BLVRBP30043 206 aaPredicted RBP13.3□□□□□ -0.28
CHMP1A-209ENST00000550872 ERVFRD-1P60508 538 aa13.3□□□□□ -0.28
CHMP1A-209ENST00000550872 GPR107Q5VW38 600 aa13.3□□□□□ -0.28
CHMP1A-209ENST00000550872 SLC35E4Q6ICL7 350 aa13.3□□□□□ -0.28
CHMP1A-209ENST00000550872 SFXN4Q6P4A7 337 aa13.3□□□□□ -0.28
CHMP1A-209ENST00000550872 CORO2AQ92828 525 aa13.3□□□□□ -0.28
CHMP1A-209ENST00000550872 TNFRSF14Q92956 283 aa13.3□□□□□ -0.28
CHMP1A-209ENST00000550872 NCOR1P1Q9H4R4 102 aa13.3□□□□□ -0.28
CHMP1A-209ENST00000550872 OCEL1Q9H607 264 aa13.3□□□□□ -0.28
CHMP1A-209ENST00000550872 UNKLQ9H9P5 680 aaKnown RBP13.3□□□□□ -0.28
CHMP1A-209ENST00000550872 ETAA1Q9NY74 926 aa13.3□□□□□ -0.28
CHMP1A-209ENST00000550872 IGHV1-69DA0A0B4J2H0 117 aa13.29□□□□□ -0.28
CHMP1A-209ENST00000550872 TMEM30CPA0ZSE6 113 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms