RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 MALRD1Q5VYJ5 2156 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 DSCAML1Q8TD84 2053 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 LOC105371242A0A075B767 164 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 A0A0B4J203 849 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 TRAV24A0A0B4J272 114 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 IGHV4-61A0A0C4DH41 118 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 RAB27BO00194 218 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 SOCS1O15524 211 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 HPGDSO60760 199 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 RBP4P02753 201 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 GZMHP20718 246 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 DTYMKP23919 212 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 CDK2P24941 298 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 OR3A1P47881 315 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 P2RX3P56373 397 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 EDDM3BP56851 147 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 GNG2P59768 71 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 LMO4P61968 165 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 RPL31P62899 125 aaKnown RBP8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 ARFRP1Q13795 201 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 SRSF7Q16629 238 aaKnown RBP eCLIP8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 C4orf48Q5BLP8 95 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 PYHIN1Q6K0P9 492 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 SPNS3Q6ZMD2 512 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 ZNF497Q6ZNH5 498 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 C17orf107Q6ZR85 190 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 KIR3DL3Q8N743 410 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 FAM216BQ8N7L0 139 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 LINC01356Q8N9X3 169 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 ZNRF1Q8ND25 227 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 C19orf18Q8NEA5 215 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 C8orf46Q8TAG6 207 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 S100ZQ8WXG8 99 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 H1FXQ92522 213 aaKnown RBP8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 ARHGAP5-AS1Q96IT6 56 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 CMSS1Q9BQ75 279 aaKnown RBP8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 PECRQ9BY49 303 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 PPA2Q9H2U2 334 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 GAL3ST2Q9H3Q3 398 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 SCPEP1Q9HB40 452 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 TAS2R3Q9NYW6 316 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 KCNIP1Q9NZI2 227 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 IL36RNQ9UBH0 155 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 EXTL2Q9UBQ6 330 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 ITGB1BP2Q9UKP3 347 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 UBE2J1Q9Y385 318 aaPredicted RBP8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 LINC00312Q9Y6C7 94 aa8.12□□□□□ -1.11
SMARCD1-206ENST00000549274 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.12□□□□□ -1.114e-8■■■■□ 19.8
SMARCD1-206ENST00000549274 PDZD2O15018 2839 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 CSMD2Q7Z408 3487 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 TRAV18A0A075B6X5 111 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 TRBV6-6A0A0A6YYG2 114 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 KIR2DS1A0A191URI9 304 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 A0A1W2PQ09 198 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 ZNF729A6NN14 1252 aaPredicted RBP8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 FOXI3A8MTJ6 420 aaPredicted RBP8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 RNF223E7ERA6 249 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 MFNGO00587 321 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 MSMBP08118 114 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 MELTFP08582 738 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 FOSL1P15407 271 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 ELK1P19419 428 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 PRSS3P35030 304 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 KIR2DS4P43632 304 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 CEBPDP49716 269 aaPredicted RBP8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 EFNB2P52799 333 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 TAS2R20P59543 309 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 ZNF45Q02386 682 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 SSBP1Q04837 148 aaKnown RBP8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 KIR2DS1Q14954 304 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 CDNFQ49AH0 187 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 HACD4Q5VWC8 232 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 LYPD2Q6UXB3 125 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 GLCCI1Q86VQ1 547 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 KRTAP1-3Q8IUG1 177 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 GAPTQ8N292 157 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 OR10A7Q8NGE5 316 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 CORO2AQ92828 525 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 SEH1LQ96EE3 360 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 NICN1Q9BSH3 213 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 DCTN5Q9BTE1 182 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 RSRP1Q9BUV0 290 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 SHARPINQ9H0F6 387 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 KCNK15Q9H427 330 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 NARFLQ9H6Q4 476 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 CHMP1AQ9HD42 196 aaPredicted RBP8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 CTSZQ9UBR2 303 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 RPUSD1Q9UJJ7 312 aaKnown RBP8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 TRAPPC2LQ9UL33 140 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 AKAP9Q99996 3911 aa8.11□□□□□ -1.11
SMARCD1-206ENST00000549274 MEIKINA0A087WXM9 373 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 A0A0A6YYD4 124 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 A0A0G2JMP0 313 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 A0A0X1KG70 313 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 TMEM82A0PJX8 343 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 ODAMA1E959 279 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 FABP12A6NFH5 140 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 J3QLI3 93 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 M0R1W7 72 aa8.1□□□□□ -1.11
SMARCD1-206ENST00000549274 HSPB6O14558 160 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms